PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023894080.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 280aa MW: 31896.6 Da PI: 4.467

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023894080.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.3	1.5e-09	211	244	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+++q+ +WF N+R ++ XP_023894080.1 211 WPYPTEEEKLKLSEATGLDQKQINNWFINQRKRH 244 59*****************************885 PP
2	ELK	37	7.4e-13	164	185	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK +LlrKYsgyL+sL++EF+ XP_023894080.1 164 DLKGMLLRKYSGYLSSLRKEFL 185 69*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MDNMLQVAET EVTESEMTDL IKNQISNHPL YPNLVSAYVE CQKVGAPPEM ASLLEEICRE 60 NHLLSTCSEI GADPELDEFM ESYCEALHRY REELSKPFDE ATTFLSSIEL QLSNLCKRTL 120 TRNLDYRSDE GAVGTSEEEL SCGEVDAPES QEYSSGAGTS GEQDLKGMLL RKYSGYLSSL 180 RKEFLKKRKK GKLPKDARTT LMDWWNTHYR WPYPTEEEKL KLSEATGLDQ KQINNWFINQ 240 RKRHWKPSED MRFALMEGVT SSASEPTYLD TEGGTGGDDI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	180	189	LRKEFLKKRK
2	186	190	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G70510.1	2e-83	TALE family protein