PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023894077.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 317aa MW: 35946.1 Da PI: 4.3768

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023894077.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29	1.8e-09	248	281	22	55
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+++q+ +WF N+R ++ XP_023894077.1 248 WPYPTEEEKLKLSEATGLDQKQINNWFINQRKRH 281 59*****************************885 PP
2	ELK	36.7	8.7e-13	201	222	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK +LlrKYsgyL+sL++EF+ XP_023894077.1 201 DLKGMLLRKYSGYLSSLRKEFL 222 69*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MEEFYRLNSV LSCSDEIVRV DNIVDATATT SAGFLCPMDN MLQVAETEVT ESEMTDLIKN 60 QISNHPLYPN LVSAYVECQK VGAPPEMASL LEEICRENHL LSTCSEIGAD PELDEFMESY 120 CEALHRYREE LSKPFDEATT FLSSIELQLS NLCKRTLTRN LDYRSDEGAV GTSEEELSCG 180 EVDAPESQEY SSGAGTSGEQ DLKGMLLRKY SGYLSSLRKE FLKKRKKGKL PKDARTTLMD 240 WWNTHYRWPY PTEEEKLKLS EATGLDQKQI NNWFINQRKR HWKPSEDMRF ALMEGVTSSA 300 SEPTYLDTEG GTGGDDI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	217	226	LRKEFLKKRK
2	223	227	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G70510.1	6e-83	TALE family protein