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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023894034.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | WRKY | ||||||||
Protein Properties | Length: 325aa MW: 36305.6 Da PI: 7.5934 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96.9 | 1.4e-30 | 169 | 228 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rsaedp+++++tYegeHnh+ XP_023894034.1 169 VQDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSAEDPSFLVVTYEGEHNHH 228 58***************************99****************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MSSKTASTMD SRCLDTSLDL NLGTLGHMKE EETPKREYLG DLPHVDGKAL VKGEYEKAGL 60 LVEELHRMSS ENKKLTEMLV HLCENYNAFQ SHLKDLKSKH SEQESMDSRK RKAERDYHGN 120 MIGINGNNEC SSSDDHEESR KRPKEETIKT KVKRFCVRSS DTSNNSLPVQ DGYQWRKYGQ 180 KVTRDNPSPR AYFKCSFAPS CPVKKKVQRS AEDPSFLVVT YEGEHNHHKN PSQVEVSLGL 240 SQCENLESPS ISASMRSSAP TTVTLDLVQP GGLHDSAKKS NQGVESPAFQ QFLVQQMASS 300 LTKDPNFTSA LAAAISGRIL DYTTN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G31800.2 | 2e-76 | WRKY family protein |