PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023894033.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 337aa    MW: 37671.1 Da    PI: 7.3412
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023894033.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.81.4e-30181240159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ ++++ pr+Y++C++a +Cpvkkkv+rsaedp+++++tYegeHnh+
  XP_023894033.1 181 VQDGYQWRKYGQKVTRDNPSPRAYFKCSFApSCPVKKKVQRSAEDPSFLVVTYEGEHNHH 240
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MSSKTASTMD SRCLDTSLDL NLGTLGHMKE EETPDLYIKS SSTLEQKREY LGDLPHVDGK  60
ALVKGEYEKA GLLVEELHRM SSENKKLTEM LVHLCENYNA FQSHLKDLKS KHSEQESMDS  120
RKRKAERDYH GNMIGINGNN ECSSSDDHEE SRKRPKEETI KTKVKRFCVR SSDTSNNSLP  180
VQDGYQWRKY GQKVTRDNPS PRAYFKCSFA PSCPVKKKVQ RSAEDPSFLV VTYEGEHNHH  240
KNPSQVEVSL GLSQCENLES PSISASMRSS APTTVTLDLV QPGGLHDSAK KSNQGVESPA  300
FQQFLVQQMA SSLTKDPNFT SALAAAISGR ILDYTTN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.17e-75WRKY family protein