PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023893319.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 477aa MW: 52101.8 Da PI: 9.2166

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023893319.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.5	2.3e-32	196	252	3	60
-SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers d+++ ei+Y+geH h+k XP_023893319.1 196 DGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSL-DGQIAEIVYKGEHSHSK 252 9*************************************.*************85 PP
2	WRKY	105.7	2.5e-33	396	453	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg+++prsYYrCts +C+v+k+ver+++dp+++++tYeg+Hnhe XP_023893319.1 396 TDGFRWRKYGQKVVKGNPYPRSYYRCTSLKCNVRKHVERASDDPRAFITTYEGKHNHE 453 6********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MDTKEAERIV IAKPVASRPT CSTFRSFSEL LAGAINASPS NVCSETAVAA IRPKTVRFKP 60 MVNHGPAGLV SSQAEISGTA VCNSSDKVLK LDSKSTVVYK PLAKLASKRT VSLLANMGNF 120 NTSLQQPQPS VDASVQHPNQ EKHNFRPRLS TNLHQNNPSY VETNRTVGPS KIASQNLEED 180 AKALPPTANG DRPSYDGYNW RKYGQKQVKG SEYPRSYYKC THPNCPVKKK VERSLDGQIA 240 EIVYKGEHSH SKPQPPKRNS SGTQALAIVS DGAGQDTNTP LWANHNNEGN ESSEGRVENQ 300 NEVGLSAPST YPGKAIVPFD PVSTGTINAG GGTPDNSCGL SGECEEGSRA IEPEDDEPRS 360 KRRKSENQSN EAGIPGEGVQ EPRIVVQNST DTEITTDGFR WRKYGQKVVK GNPYPRSYYR 420 CTSLKCNVRK HVERASDDPR AFITTYEGKH NHEMPVKNTN PVASETDSLP PKSKDKR

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MDTKEAERIV IAKPVASRPT CSTFRSFSEL LAGAINASPS NVCSETAVAA IRPKTVRFKP  60
MVNHGPAGLV SSQAEISGTA VCNSSDKVLK LDSKSTVVYK PLAKLASKRT VSLLANMGNF  120
NTSLQQPQPS VDASVQHPNQ EKHNFRPRLS TNLHQNNPSY VETNRTVGPS KIASQNLEED  180
AKALPPTANG DRPSYDGYNW RKYGQKQVKG SEYPRSYYKC THPNCPVKKK VERSLDGQIA  240
EIVYKGEHSH SKPQPPKRNS SGTQALAIVS DGAGQDTNTP LWANHNNEGN ESSEGRVENQ  300
NEVGLSAPST YPGKAIVPFD PVSTGTINAG GGTPDNSCGL SGECEEGSRA IEPEDDEPRS  360
KRRKSENQSN EAGIPGEGVQ EPRIVVQNST DTEITTDGFR WRKYGQKVVK GNPYPRSYYR  420
CTSLKCNVRK HVERASDDPR AFITTYEGKH NHEMPVKNTN PVASETDSLP PKSKDKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37260.1	1e-120	WRKY family protein