PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023889480.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 546aa MW: 60734.3 Da PI: 7.911

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023889480.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.1	1.5e-08	465	503	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + XP_023889480.1 465 MFQNflHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVR 503 5887779******************************88 PP
2	BELL	81	1.6e-26	337	406	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r+++++kk++Llsll+ Vd+rY+q++++++tvis+F+a+++l++ ++++++A ++iS+ +++L+++i+++i XP_023889480.1 337 RRAIEAKKTQLLSLLQVVDERYNQCMDEVHTVISAFHAATELDP-QIHARFAIRTISFLYKNLRERISNHI 406 7899**************************************.*********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MMDNDLFRVP IDMSSQSAVY IVLSELQGET INGLHPALHT TNGVGIVESN ELVSLLGRNV 60 VRGSSLSSSR LTSNTEFQEQ LAGGNSISTA SLATFLSSRT GLQDNLNSLA ISTPSICPLE 120 FLGTYASNGC SNGLNSSFTT SVNCGYDEVL GGKFPVRAEL QPYSSTGNAG ANGCMSSSSG 180 NLTANRPYSS TNFNNELSLT LATSERSVLS GINIPDRCSE MGVSGVTRHC LNEKRLSSEQ 240 TSCNSKELSV SFGSYKPTRF SQVILGSRYL RVIQEILVQI ANYSLENLDH MSYSNGRSGA 300 CSNMPFSSNC SAERWMSSMV PDVDGGFEPE MESTLRRRAI EAKKTQLLSL LQVVDERYNQ 360 CMDEVHTVIS AFHAATELDP QIHARFAIRT ISFLYKNLRE RISNHILAMG AHFSSPCTKE 420 KERSFETSFI QKQWALQQLK SKDHQLWRPQ RGLPERSVSV LRAWMFQNFL HPYPKDAEKH 480 LLAVKSGLTR SQVSNWFINA RVRLWKPMIE EMYAEMNRRK AHRDDEASQS DQRSHISINN 540 PRLNVT

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MMDNDLFRVP IDMSSQSAVY IVLSELQGET INGLHPALHT TNGVGIVESN ELVSLLGRNV  60
VRGSSLSSSR LTSNTEFQEQ LAGGNSISTA SLATFLSSRT GLQDNLNSLA ISTPSICPLE  120
FLGTYASNGC SNGLNSSFTT SVNCGYDEVL GGKFPVRAEL QPYSSTGNAG ANGCMSSSSG  180
NLTANRPYSS TNFNNELSLT LATSERSVLS GINIPDRCSE MGVSGVTRHC LNEKRLSSEQ  240
TSCNSKELSV SFGSYKPTRF SQVILGSRYL RVIQEILVQI ANYSLENLDH MSYSNGRSGA  300
CSNMPFSSNC SAERWMSSMV PDVDGGFEPE MESTLRRRAI EAKKTQLLSL LQVVDERYNQ  360
CMDEVHTVIS AFHAATELDP QIHARFAIRT ISFLYKNLRE RISNHILAMG AHFSSPCTKE  420
KERSFETSFI QKQWALQQLK SKDHQLWRPQ RGLPERSVSV LRAWMFQNFL HPYPKDAEKH  480
LLAVKSGLTR SQVSNWFINA RVRLWKPMIE EMYAEMNRRK AHRDDEASQS DQRSHISINN  540
PRLNVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-120	TALE family protein