PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023889479.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 577aa MW: 64178 Da PI: 7.5664

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023889479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26	1.6e-08	496	534	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + XP_023889479.1 496 MFQNflHPYPKDAEKHLLAVKSGLTRSQVSNWFINARVR 534 5887779******************************88 PP
2	BELL	80.9	1.7e-26	368	437	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r+++++kk++Llsll+ Vd+rY+q++++++tvis+F+a+++l++ ++++++A ++iS+ +++L+++i+++i XP_023889479.1 368 RRAIEAKKTQLLSLLQVVDERYNQCMDEVHTVISAFHAATELDP-QIHARFAIRTISFLYKNLRERISNHI 437 7899**************************************.*********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MMDNDLFRVP IDMSSQSAVY IGGFQQHTTP NSLVQSDSFD LNRENHIMSG FPVLSELQGE 60 TINGLHPALH TTNGVGIVES NELVSLLGRN VVRGSSLSSS RLTSNTEFQE QLAGGNSIST 120 ASLATFLSSR TGLQDNLNSL AISTPSICPL EFLGTYASNG CSNGLNSSFT TSVNCGYDEV 180 LGGKFPVRAE LQPYSSTGNA GANGCMSSSS GNLTANRPYS STNFNNELSL TLATSERSVL 240 SGINIPDRCS EMGVSGVTRH CLNEKRLSSE QTSCNSKELS VSFGSYKPTR FSQVILGSRY 300 LRVIQEILVQ IANYSLENLD HMSYSNGRSG ACSNMPFSSN CSAERWMSSM VPDVDGGFEP 360 EMESTLRRRA IEAKKTQLLS LLQVVDERYN QCMDEVHTVI SAFHAATELD PQIHARFAIR 420 TISFLYKNLR ERISNHILAM GAHFSSPCTK EKERSFETSF IQKQWALQQL KSKDHQLWRP 480 QRGLPERSVS VLRAWMFQNF LHPYPKDAEK HLLAVKSGLT RSQVSNWFIN ARVRLWKPMI 540 EEMYAEMNRR KAHRDDEASQ SDQRSHISIN NPRLNVT

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MMDNDLFRVP IDMSSQSAVY IGGFQQHTTP NSLVQSDSFD LNRENHIMSG FPVLSELQGE  60
TINGLHPALH TTNGVGIVES NELVSLLGRN VVRGSSLSSS RLTSNTEFQE QLAGGNSIST  120
ASLATFLSSR TGLQDNLNSL AISTPSICPL EFLGTYASNG CSNGLNSSFT TSVNCGYDEV  180
LGGKFPVRAE LQPYSSTGNA GANGCMSSSS GNLTANRPYS STNFNNELSL TLATSERSVL  240
SGINIPDRCS EMGVSGVTRH CLNEKRLSSE QTSCNSKELS VSFGSYKPTR FSQVILGSRY  300
LRVIQEILVQ IANYSLENLD HMSYSNGRSG ACSNMPFSSN CSAERWMSSM VPDVDGGFEP  360
EMESTLRRRA IEAKKTQLLS LLQVVDERYN QCMDEVHTVI SAFHAATELD PQIHARFAIR  420
TISFLYKNLR ERISNHILAM GAHFSSPCTK EKERSFETSF IQKQWALQQL KSKDHQLWRP  480
QRGLPERSVS VLRAWMFQNF LHPYPKDAEK HLLAVKSGLT RSQVSNWFIN ARVRLWKPMI  540
EEMYAEMNRR KAHRDDEASQ SDQRSHISIN NPRLNVT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-119	TALE family protein