PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023888322.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 602aa MW: 66547.5 Da PI: 7.0816

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023888322.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.6	2.7e-33	256	313	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_023888322.1 256 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 313 8**************************************.*************85 PP
2	WRKY	106.6	1.3e-33	429	487	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_023888322.1 429 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHD 487 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MASSSGSLDT SANSHPASFT FSTHPFMTTS FSDLLASPND IDDHNTTLEN RNRSLSDRIA 60 ERTGSGVPKF KSIPPPLPIS PPAVSPSSYF AIPAGLSPAE LLDSPVLLNT SNILPSPTTG 120 TFPAQAFNWR SNFINQQQNV KQENKNYSDF SFQTQQRPPL SSTTNYQPSN TAIQSVQPQA 180 WSFQEPTKQD DFSTGKSMVK AEFGSMQGYS SDITTITSNT QSNNNNNNIN NSGLQSEYGN 240 YHQQPQQPQT LSRRSDDGYN WRKYGQKQVK GSENPRSYYK CTYPNCPTKK KVERSLDGQI 300 TEIVYKGSHN HPKPQSTRRS SSASSASSHA IQVSNSSSHE LHDQSYATLG NGHMDSVATP 360 ENSSISMGDE DFDQSSQKSK SAGDDYDEDE PDAKRWKKEG ENEGISAAGS RTVREPRVVV 420 QTTSDIDILD DGYRWRKYGQ KVVKGNPNPR SYYKCTHPGC PVRKHVERAS HDLRAVITTY 480 EGKHNHDVPA ARGSGSHSVN RPLPINNNNN ISAATAVRPS AITHQTNNSV NNPHLHNLRL 540 PTSEGQAPFT LEMLHSPGSF VYSGFGNAID SYMNQQQEVT DNVYSRAKEE PRDDMFYETL 600 LA

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MASSSGSLDT SANSHPASFT FSTHPFMTTS FSDLLASPND IDDHNTTLEN RNRSLSDRIA  60
ERTGSGVPKF KSIPPPLPIS PPAVSPSSYF AIPAGLSPAE LLDSPVLLNT SNILPSPTTG  120
TFPAQAFNWR SNFINQQQNV KQENKNYSDF SFQTQQRPPL SSTTNYQPSN TAIQSVQPQA  180
WSFQEPTKQD DFSTGKSMVK AEFGSMQGYS SDITTITSNT QSNNNNNNIN NSGLQSEYGN  240
YHQQPQQPQT LSRRSDDGYN WRKYGQKQVK GSENPRSYYK CTYPNCPTKK KVERSLDGQI  300
TEIVYKGSHN HPKPQSTRRS SSASSASSHA IQVSNSSSHE LHDQSYATLG NGHMDSVATP  360
ENSSISMGDE DFDQSSQKSK SAGDDYDEDE PDAKRWKKEG ENEGISAAGS RTVREPRVVV  420
QTTSDIDILD DGYRWRKYGQ KVVKGNPNPR SYYKCTHPGC PVRKHVERAS HDLRAVITTY  480
EGKHNHDVPA ARGSGSHSVN RPLPINNNNN ISAATAVRPS AITHQTNNSV NNPHLHNLRL  540
PTSEGQAPFT LEMLHSPGSF VYSGFGNAID SYMNQQQEVT DNVYSRAKEE PRDDMFYETL  600
LA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-112	WRKY family protein