PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023888188.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

DBB

Protein Properties

Length: 295aa MW: 32061.2 Da PI: 5.0082

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023888188.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.9	1.5e-06	4	47	5	42
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 C+ +e e++ C ++ lC C ++ H H++vpl XP_023888188.1 4 QCNVCEAAEATVLCCADEAALCWACDEKVHAAnklaskHQRVPL 47 7****99*******************66899999999986 PP
2	zf-B_box	26.8	1e-08	53	93	3	37
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 +++C+ ++e +fC +++ llC++C +++H H XP_023888188.1 53 PPNCDICQETVGYFFCLEDRALLCRKCDVAIHTAniyvsaH 93 589****99*******************545666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence
MKIQCNVCEA AEATVLCCAD EAALCWACDE KVHAANKLAS KHQRVPLSTS HMPPNCDICQ 60 ETVGYFFCLE DRALLCRKCD VAIHTANIYV SAHQRFLLTG VKVGLEPTDP VASSSSVKSH 120 SGEENLETKS HCVSRRDAPL PMAVQCNKVL PIPVGGVGDF AAPKVPYSGG SVAGSILQWP 180 IDEYLGLPEF NQSYGYMDNG SSKADSSKLG ETDSPILRGA EEELDDDECL GQVPEASWTV 240 PQITSPPTAS GLYWPKNYQN SLDGAVFVPD ICHLHVQNPQ DCQHNGTISK RWRQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	2e-94	DBB family protein