PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023888163.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 175aa MW: 20484.2 Da PI: 8.6245 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.1 | 1.3e-17 | 14 | 69 | 1 | 56 |
TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +r+++++++eq+ Le+ F +n+ + e++ +LA++lg++ rqV +W+qN+Ra++k XP_023888163.1 14 KRNKQRLNQEQVSLLERSFISNNRLEPERKLQLANQLGVPPRQVAIWYQNKRARWK 69 78999**************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 101 | 1e-32 | 16 | 107 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +k+rl++eqv+lLE+sF ++++LeperK +la++Lg+ prqva+W+qn+RAR+kt++l dy+ L+ ++++ e++r+ekeve+L+ el++ XP_023888163.1 16 NKQRLNQEQVSLLERSFISNNRLEPERKLQLANQLGVPPRQVAIWYQNKRARWKTQNLKLDYNELQLKLENALVEKRRVEKEVERLKGELEK 107 79*************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MDFFHTQNRK YPTKRNKQRL NQEQVSLLER SFISNNRLEP ERKLQLANQL GVPPRQVAIW 60 YQNKRARWKT QNLKLDYNEL QLKLENALVE KRRVEKEVER LKGELEKAKE MVCTLKQTVD 120 PQVSCNSISF DHEAARSSSL HAADVNCSIE NNGEFLPLNE DFYACFIGVN GSSWE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G53980.1 | 3e-24 | HD-ZIP family protein |