PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023887810.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 753aa MW: 81033.5 Da PI: 6.3548

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023887810.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	102.5	2.5e-32	327	384	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g Hnh+k XP_023887810.1 327 EDGYNWRKYGQKQVKGSEYPRSYYKCTHSNCPVKKKVERSH-EGHITEIIYKGAHNHPK 384 7**************************************.*************85 PP
2	WRKY	103.7	1e-32	541	599	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ XP_023887810.1 541 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 599 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 753 aa Download sequence
MAGIDDNVAI IGDWVPPSPS PRTFFSAMLG EDIGSRPLVS EPPSSNRSEG LFLGRPPDQM 60 VSGNRTVNNN GTLQGCLSSD KLAEFRSFSE QKSSSRGGLV ERMAARAGFN APRLNTESIR 120 SADLSLSSDN RSPYLTIPPG LSPTTLLDSP VFLSNSLAQP SPTTGKFPFV SNVDGRSLTL 180 MPEASDKSKD SLFEDINTSS FAFKPMPEPG TSFFFGTSSK MTPATLPQQS FPRIEVSVQS 240 ENSLQSAEPT KVQTQNRTNL HTQADFSRSS TEKDNGANTI SVDQRAFDAV GGIVEHSPPL 300 DEQQDEEADQ RGNGDPMAAG GGGAPSEDGY NWRKYGQKQV KGSEYPRSYY KCTHSNCPVK 360 KKVERSHEGH ITEIIYKGAH NHPKPPPNRR SAIGSGNPLV DMQLDIPEQA VPQSGADGEP 420 VWASTQKGVV AGASDWRHDN LEVTSSASVG PEYQSASVQA QNGTHFESSD AVDASSTFSN 480 DEDEDDRGTH GSVSLGYDGE GDESESKRRK IEAYATEMSG ATRAIREPRV VVQTTSEVDI 540 LDDGYRWRKY GQKVVKGNPN PRSYYKCTSA GCTVRKHVER ASHDLKSVIT TYEGKHNHDV 600 PAARNSSHVN SGASSAVPAQ ASAAAAVQAH VHRPEPSQVH PGMARFERPA SLGSFSLPGR 660 QQMGPSHGFS FGMSQPGLAN LAMAGLGPGQ AKLPVMPVHS YLAQQQRQVN EMGFMLPKGE 720 PKVEPMSEPG LNLSNGSSVY QQIMSRLPLG PQM

Sequence ? help Back to Top

Protein Sequence Length: 753 aa Download sequence

MAGIDDNVAI IGDWVPPSPS PRTFFSAMLG EDIGSRPLVS EPPSSNRSEG LFLGRPPDQM  60
VSGNRTVNNN GTLQGCLSSD KLAEFRSFSE QKSSSRGGLV ERMAARAGFN APRLNTESIR  120
SADLSLSSDN RSPYLTIPPG LSPTTLLDSP VFLSNSLAQP SPTTGKFPFV SNVDGRSLTL  180
MPEASDKSKD SLFEDINTSS FAFKPMPEPG TSFFFGTSSK MTPATLPQQS FPRIEVSVQS  240
ENSLQSAEPT KVQTQNRTNL HTQADFSRSS TEKDNGANTI SVDQRAFDAV GGIVEHSPPL  300
DEQQDEEADQ RGNGDPMAAG GGGAPSEDGY NWRKYGQKQV KGSEYPRSYY KCTHSNCPVK  360
KKVERSHEGH ITEIIYKGAH NHPKPPPNRR SAIGSGNPLV DMQLDIPEQA VPQSGADGEP  420
VWASTQKGVV AGASDWRHDN LEVTSSASVG PEYQSASVQA QNGTHFESSD AVDASSTFSN  480
DEDEDDRGTH GSVSLGYDGE GDESESKRRK IEAYATEMSG ATRAIREPRV VVQTTSEVDI  540
LDDGYRWRKY GQKVVKGNPN PRSYYKCTSA GCTVRKHVER ASHDLKSVIT TYEGKHNHDV  600
PAARNSSHVN SGASSAVPAQ ASAAAAVQAH VHRPEPSQVH PGMARFERPA SLGSFSLPGR  660
QQMGPSHGFS FGMSQPGLAN LAMAGLGPGQ AKLPVMPVHS YLAQQQRQVN EMGFMLPKGE  720
PKVEPMSEPG LNLSNGSSVY QQIMSRLPLG PQM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein