PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023886944.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 292aa    MW: 32536.5 Da    PI: 8.6433
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023886944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.48.1e-30135194159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dgy+WrKYGqK+ +++++pr+Y++C++a +Cpvkkkv+rs ed+++++ tYegeHnh+
  XP_023886944.1 135 VKDGYQWRKYGQKVTRDNPCPRAYFKCSFApSCPVKKKVQRSVEDQSILVATYEGEHNHP 194
                     58***************************99****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
FGFQNEEMES NFIDFERKLS VKQETGALVE ELNRVSAENR KLTEMLTVMC ENYNALRSQL  60
MDYMSKNPEK ELSPSRKRKS ESSNNINNNA NGINGNSESS STDDESCKKP REGTIKAKIS  120
RSYVKTEASD TSLVVKDGYQ WRKYGQKVTR DNPCPRAYFK CSFAPSCPVK KKVQRSVEDQ  180
SILVATYEGE HNHPHPSQLE ATSGSNRCVT LASLPCSASL SSSGPTLTLE LTKSKSSTND  240
IKPSKPKIDS PEIKQFLVEQ MASSLTKDPN FTAALVAAIS GKMLHQNQTE KW
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17580SRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.14e-96WRKY family protein