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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023886388.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | WRKY | ||||||||
Protein Properties | Length: 311aa MW: 34469.2 Da PI: 6.5197 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 107.2 | 8.4e-34 | 173 | 230 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+vers +dp++v++tYeg+Hnh+ XP_023886388.1 173 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCTVKKRVERSFQDPSTVITTYEGQHNHP 230 8********************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MSDEPRDLYY HDLFQDNQHL ASGTGMYNQK PPTIAGSSAY NSQGFDPSYM SFTECLQGPM 60 DYNSLASAFG LSPSSSEVFS SVEGNPKPID VGDLGGGGGN ENLVTQNSSI SSSSTEAGVE 120 EDSDKSKKDG QPKESEDGGE SSKKVGKAKK KGEKKQREPR FAFMTKSEVD HLEDGYRWRK 180 YGQKAVKNSP YPRSYYRCTT QKCTVKKRVE RSFQDPSTVI TTYEGQHNHP IPATLRGNAA 240 AMFPPSMFTP QIRGPIFPQD FFVQMPQMGS QGGANSIYSQ NLMNNPHQQY QLPDYGLLQD 300 IIPSMFLKQE P |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18170.1 | 3e-61 | WRKY family protein |