PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023884542.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 498aa MW: 54926.4 Da PI: 6.978

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023884542.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	98.4	4.6e-31	242	300	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_023884542.1 242 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCAEDMSILITTYEGNHNHP 300 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MISSRAGEAN EPVENSMDAK PVVIKEFDFF SANDNCEPLI RKGSPEFPHQ DDKVASPPLL 60 TPKEPSNTNL SMLRVKLEQV RDENRNLRSL LDRATKNYTA LHDHLLSVMP KPAHVNHSLP 120 KDERQEVGGS TLPARQSKDP VTSTSILDIN EALHSEDKTQ ERLASPENNN MEVMSKEMDH 180 NMTDQIGRKH WSSNNDNDVD HTTHRWGAPG QNLEEENRPD QQVFCKKARV SIRARSDAPL 240 MSDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDMSILI TTYEGNHNHP 300 LPPAATVMAS TTSAAVNMLL SGSTTTTTSS NGSHNFNPSN PSLFPSMLTN YAISPTMATL 360 STSSPYPTIT LDLTHTTHHP MQRPPNFSLP SPPTFFPLPL HNGVPQQQQQ LTGHHHHPLY 420 MSSNKPPTTL VDSVSAAIAT DRNFTTALMA AVSSIMGSTQ NKNNTSNISG QDTCSDEMAV 480 VPVSPQRPDQ SCTTFATN

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MISSRAGEAN EPVENSMDAK PVVIKEFDFF SANDNCEPLI RKGSPEFPHQ DDKVASPPLL  60
TPKEPSNTNL SMLRVKLEQV RDENRNLRSL LDRATKNYTA LHDHLLSVMP KPAHVNHSLP  120
KDERQEVGGS TLPARQSKDP VTSTSILDIN EALHSEDKTQ ERLASPENNN MEVMSKEMDH  180
NMTDQIGRKH WSSNNDNDVD HTTHRWGAPG QNLEEENRPD QQVFCKKARV SIRARSDAPL  240
MSDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDMSILI TTYEGNHNHP  300
LPPAATVMAS TTSAAVNMLL SGSTTTTTSS NGSHNFNPSN PSLFPSMLTN YAISPTMATL  360
STSSPYPTIT LDLTHTTHHP MQRPPNFSLP SPPTFFPLPL HNGVPQQQQQ LTGHHHHPLY  420
MSSNKPPTTL VDSVSAAIAT DRNFTTALMA AVSSIMGSTQ NKNNTSNISG QDTCSDEMAV  480
VPVSPQRPDQ SCTTFATN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01720.1	6e-62	WRKY family protein