PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023883570.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 276aa    MW: 29804.9 Da    PI: 5.6792
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023883570.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.91.2e-2972130259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YY+C+s+ gCp++k+vers+ dp+++ itY  +Hnh+
  XP_023883570.1  72 SDSWAWRKYGQKPIKGSPYPRGYYKCSSSkGCPARKQVERSHVDPTTLLITYACDHNHP 130
                     69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MNRRFHTNPF VTDPDEPEAE NGLDSPSSGD DTKISSAPSP KKSKRDLKKR VVSVPIGDVE  60
GSKSKGEAYP PSDSWAWRKY GQKPIKGSPY PRGYYKCSSS KGCPARKQVE RSHVDPTTLL  120
ITYACDHNHP LPTSKNHSSS STKAAAAAAA ATKVSANFPP EEVGVFSEDP SSSSPPLLDD  180
HFEWYSDVAT AKILESPVSA GSMCTEADVA MVFAMGEEEE SLFADLGELP ECSLVFRSRR  240
SVVKIEPDNN NNNNNNVESN RTSWGSSVLP CCGTTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.12e-63WRKY family protein