PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023882169.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 357aa    MW: 39412.3 Da    PI: 6.5104
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023882169.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.91.5e-31177235259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp++++itY+geH+h+
  XP_023882169.1 177 ADVWAWRKYGQKPIKGSPYPRNYYRCSSTkGCPARKQVERSNTDPNTFIITYTGEHTHP 235
                     69*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MTDWDLNAVV RSCKYSTTTT TTNTTAASEN PLSCLASLTF KEESDPFSFP QFVEPRTDAF  60
QELQELCKPF FPTTTTTTTT FTTTSHGVKP NSSISDLQHR LHGSSSFGFR GILDQQRLQG  120
PRQQQQQQQV YQQEFLKPQA SSPMSLPTMQ SQVPRARKRK NQQKRTVRHV TADNLSADVW  180
AWRKYGQKPI KGSPYPRNYY RCSSTKGCPA RKQVERSNTD PNTFIITYTG EHTHPRPTHR  240
NSLAGSVRNK FKSTDAANTN DEEAANLHNI NEETDKMIDG NDKESEEMVD DEEDDDILIP  300
NIAMNEDIFM GLQELGYGNS PGGGSGDNFS GGSTPRGGAS SGSSWAPCGS AAAVGGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.11e-56WRKY family protein