PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023881872.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CPP

Protein Properties

Length: 799aa MW: 87641.4 Da PI: 6.9437

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023881872.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.5	1.7e-15	477	515	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCk+skClk+YCeCfaag++C ++C C +C+Nk e XP_023881872.1 477 CKRCNCKRSKCLKLYCECFAAGVYCVDSCACINCFNKPE 515 79**********************************976 PP
2	TCR	50.4	4.3e-16	563	601	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClkkYCeC++a++ Cs+ C+Ce+C+N+ XP_023881872.1 563 RHKRGCNCKKSKCLKKYCECYQANVGCSNGCRCEGCQNS 601 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 799 aa Download sequence
MSSPECNRVA ATSSPSSSNK SPPVQESPFS NFLSNLSPIK SVKAVRYTQR FLESNFPTPP 60 PVFTSPRIDL QRETGLLERN NIVEEDSNIR EQCNTQLNVA QIPSLEKEVQ SCSPSGSVDE 120 YLADIVEVDC THSAHKQLQL ANEVSQMLQG GFTDPKETIR KVDTEHGRGS REARTLTSSD 180 QAEQNLPLTS LNLVDDLVDL RNDESFNVFL KITSEDVNDI VDPDVNLNPA LGAQQNEQYA 240 AQEANHHQRG IRRHLHFEAA LACKSVATGN ATNSRASLTN LKGLGLSHVE SRATSSGREA 300 VNHAQSRASK SSFSPFEVVR STQNSRNPVI LSPIPSGMGL HLNSTVRSVS LGTDMFASKN 360 LTRYRSSQDK VVSERSNDSA EDPNSTSISA VAGTMYSYAD IDQQESQAGV AASSDTYPIN 420 SLNPPCDSPL AQTEQKVIPC EGRISTPQNA DSVEELNEES SNKKRKRPSN TSESHGCKRC 480 NCKRSKCLKL YCECFAAGVY CVDSCACINC FNKPEYEDTV LDIRQQIESR NPLAFAPKVV 540 KHDTDSPAII MEAGNRNTPS SARHKRGCNC KKSKCLKKYC ECYQANVGCS NGCRCEGCQN 600 SFGTSSECRR VENPSHEVSG KDGSIEQFSP TWQGLADIRS LAPCSGALMF ASSNIRDCSK 660 VSQTKLQRGS SIQPQAGSLQ WNYSPVILTP QLCDSKGSHE LTSDSALCDI MEEEDMREIL 720 KDTSTPLKAV KASSLNQKQV MPPHYRSDSQ RSSSPHGTRS VRKFILQTMP PFPPLTPYSN 780 SKGRVNQKEN DQKDNIGNH

Sequence ? help Back to Top

Protein Sequence Length: 799 aa Download sequence

MSSPECNRVA ATSSPSSSNK SPPVQESPFS NFLSNLSPIK SVKAVRYTQR FLESNFPTPP  60
PVFTSPRIDL QRETGLLERN NIVEEDSNIR EQCNTQLNVA QIPSLEKEVQ SCSPSGSVDE  120
YLADIVEVDC THSAHKQLQL ANEVSQMLQG GFTDPKETIR KVDTEHGRGS REARTLTSSD  180
QAEQNLPLTS LNLVDDLVDL RNDESFNVFL KITSEDVNDI VDPDVNLNPA LGAQQNEQYA  240
AQEANHHQRG IRRHLHFEAA LACKSVATGN ATNSRASLTN LKGLGLSHVE SRATSSGREA  300
VNHAQSRASK SSFSPFEVVR STQNSRNPVI LSPIPSGMGL HLNSTVRSVS LGTDMFASKN  360
LTRYRSSQDK VVSERSNDSA EDPNSTSISA VAGTMYSYAD IDQQESQAGV AASSDTYPIN  420
SLNPPCDSPL AQTEQKVIPC EGRISTPQNA DSVEELNEES SNKKRKRPSN TSESHGCKRC  480
NCKRSKCLKL YCECFAAGVY CVDSCACINC FNKPEYEDTV LDIRQQIESR NPLAFAPKVV  540
KHDTDSPAII MEAGNRNTPS SARHKRGCNC KKSKCLKKYC ECYQANVGCS NGCRCEGCQN  600
SFGTSSECRR VENPSHEVSG KDGSIEQFSP TWQGLADIRS LAPCSGALMF ASSNIRDCSK  660
VSQTKLQRGS SIQPQAGSLQ WNYSPVILTP QLCDSKGSHE LTSDSALCDI MEEEDMREIL  720
KDTSTPLKAV KASSLNQKQV MPPHYRSDSQ RSSSPHGTRS VRKFILQTMP PFPPLTPYSN  780
SKGRVNQKEN DQKDNIGNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	9e-68	CPP family protein