PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023881871.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CPP

Protein Properties

Length: 820aa MW: 90007.9 Da PI: 6.5009

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023881871.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.4	1.8e-15	498	536	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +k+CnCk+skClk+YCeCfaag++C ++C C +C+Nk e XP_023881871.1 498 CKRCNCKRSKCLKLYCECFAAGVYCVDSCACINCFNKPE 536 79**********************************976 PP
2	TCR	50.4	4.4e-16	584	622	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClkkYCeC++a++ Cs+ C+Ce+C+N+ XP_023881871.1 584 RHKRGCNCKKSKCLKKYCECYQANVGCSNGCRCEGCQNS 622 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 820 aa Download sequence
MSSPECNRVA ATSSPSSSNK SPPVQESPFS NFLSNLSPIK SVKAVRYTQR FLESNFPTPP 60 PVFTSPRIDL QRETGLLERN NIVEEDSNIR EQCNTQLNVA QIPSLEKEVQ SCSPSGSVDE 120 YLADIVEVDC THSAHKQLQL ANEVSQMLQG GFTDPKETIR KVDTEHGRGS REARTLTSSD 180 QAEQNLPLTS LNLVDDLVDL RNDESFNVFL KITSEDVNDI VDPDVNLNPA LGAQQNEQYA 240 AQIDEAFEDS DDSSRALPKE FVNEANHHQR GIRRHLHFEA ALACKSVATG NATNSRASLT 300 NLKGLGLSHV ESRATSSGRE AVNHAQSRAS KSSFSPFEVV RSTQNSRNPV ILSPIPSGMG 360 LHLNSTVRSV SLGTDMFASK NLTRYRSSQD KVVSERSNDS AEDPNSTSIS AVAGTMYSYA 420 DIDQQESQAG VAASSDTYPI NSLNPPCDSP LAQTEQKVIP CEGRISTPQN ADSVEELNEE 480 SSNKKRKRPS NTSESHGCKR CNCKRSKCLK LYCECFAAGV YCVDSCACIN CFNKPEYEDT 540 VLDIRQQIES RNPLAFAPKV VKHDTDSPAI IMEAGNRNTP SSARHKRGCN CKKSKCLKKY 600 CECYQANVGC SNGCRCEGCQ NSFGTSSECR RVENPSHEVS GKDGSIEQFS PTWQGLADIR 660 SLAPCSGALM FASSNIRDCS KVSQTKLQRG SSIQPQAGSL QWNYSPVILT PQLCDSKGSH 720 ELTSDSALCD IMEEEDMREI LKDTSTPLKA VKASSLNQKQ VMPPHYRSDS QRSSSPHGTR 780 SVRKFILQTM PPFPPLTPYS NSKGRVNQKE NDQKDNIGNH

Sequence ? help Back to Top

Protein Sequence Length: 820 aa Download sequence

MSSPECNRVA ATSSPSSSNK SPPVQESPFS NFLSNLSPIK SVKAVRYTQR FLESNFPTPP  60
PVFTSPRIDL QRETGLLERN NIVEEDSNIR EQCNTQLNVA QIPSLEKEVQ SCSPSGSVDE  120
YLADIVEVDC THSAHKQLQL ANEVSQMLQG GFTDPKETIR KVDTEHGRGS REARTLTSSD  180
QAEQNLPLTS LNLVDDLVDL RNDESFNVFL KITSEDVNDI VDPDVNLNPA LGAQQNEQYA  240
AQIDEAFEDS DDSSRALPKE FVNEANHHQR GIRRHLHFEA ALACKSVATG NATNSRASLT  300
NLKGLGLSHV ESRATSSGRE AVNHAQSRAS KSSFSPFEVV RSTQNSRNPV ILSPIPSGMG  360
LHLNSTVRSV SLGTDMFASK NLTRYRSSQD KVVSERSNDS AEDPNSTSIS AVAGTMYSYA  420
DIDQQESQAG VAASSDTYPI NSLNPPCDSP LAQTEQKVIP CEGRISTPQN ADSVEELNEE  480
SSNKKRKRPS NTSESHGCKR CNCKRSKCLK LYCECFAAGV YCVDSCACIN CFNKPEYEDT  540
VLDIRQQIES RNPLAFAPKV VKHDTDSPAI IMEAGNRNTP SSARHKRGCN CKKSKCLKKY  600
CECYQANVGC SNGCRCEGCQ NSFGTSSECR RVENPSHEVS GKDGSIEQFS PTWQGLADIR  660
SLAPCSGALM FASSNIRDCS KVSQTKLQRG SSIQPQAGSL QWNYSPVILT PQLCDSKGSH  720
ELTSDSALCD IMEEEDMREI LKDTSTPLKA VKASSLNQKQ VMPPHYRSDS QRSSSPHGTR  780
SVRKFILQTM PPFPPLTPYS NSKGRVNQKE NDQKDNIGNH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	9e-68	CPP family protein