PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023881608.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 361aa MW: 40832.9 Da PI: 6.5049

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023881608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.3e-09	289	323	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yps++++ LA+++gL+++q+ +WF N+R ++ XP_023881608.1 289 KWPYPSESQKLALAESTGLDQKQINNWFINQRKRH 323 569*****************************885 PP
2	ELK	41.1	3.7e-14	243	264	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK qLlrKYsgyLgsLkqEF+ XP_023881608.1 243 ELKGQLLRKYSGYLGSLKQEFM 264 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MESGSNGTSC MMAFGENSSN GLCPMMMMMP LMTSHHSHHH PNADTNSLFL PLPPNNNHDH 60 QNQNRNTPTP TTTINNSSSF ILDDHNANSN TGFFFMESNN NEGSSSSVKA KIMAHPHYHR 120 LLAAYANCQK VGAPPEVVAR LEQACSTAAN MGHSASTGCI GEDPALDQFM EAYCEMLTKY 180 EQELSKPFKE AMLFLQRIEC QFKALAVSSS DSACVEAVDR NVSSEEEVDV NNNFIDPQAE 240 DRELKGQLLR KYSGYLGSLK QEFMKKRKKG KLPKEARQQL LDWWSRHYKW PYPSESQKLA 300 LAESTGLDQK QINNWFINQR KRHWKPSEDM QFVVMDATHP HYYMDNVLGN PFPMDISPTL 360 L

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MESGSNGTSC MMAFGENSSN GLCPMMMMMP LMTSHHSHHH PNADTNSLFL PLPPNNNHDH  60
QNQNRNTPTP TTTINNSSSF ILDDHNANSN TGFFFMESNN NEGSSSSVKA KIMAHPHYHR  120
LLAAYANCQK VGAPPEVVAR LEQACSTAAN MGHSASTGCI GEDPALDQFM EAYCEMLTKY  180
EQELSKPFKE AMLFLQRIEC QFKALAVSSS DSACVEAVDR NVSSEEEVDV NNNFIDPQAE  240
DRELKGQLLR KYSGYLGSLK QEFMKKRKKG KLPKEARQQL LDWWSRHYKW PYPSESQKLA  300
LAESTGLDQK QINNWFINQR KRHWKPSEDM QFVVMDATHP HYYMDNVLGN PFPMDISPTL  360
L

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	259	268	LKQEFMKKRK
2	265	269	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62360.1	1e-143	TALE family protein