PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023880720.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WOX

Protein Properties

Length: 253aa MW: 27705.9 Da PI: 5.3117

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023880720.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	48.9	1.1e-15	23	83	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p ++e ++ k l ++ +++V++WFqNrR + ++ XP_023880720.1 23 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 83 89***************99***********************************997 PP
2	Wus_type_Homeobox	107.4	8.3e-35	22	85	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G ++d+NVfyWFQNr++R+r++q XP_023880720.1 22 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 85 589***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MEDQQGQEAN SPSQGSERNE PVRSRWTPKP EQILILESIF NSGMVNPPKD ETVRIRKLLE 60 KFGSVGDANV FYWFQNRRSR SRRRQRQMQA NLEQRNQAQA QPQLVVTSTG GATQLFESSS 120 GFSFGPLSSP SYHLGSSSSS CGVMGNDVAV DQCPFSVSGQ MGFPEIEQSS AVTPGLCASD 180 TSNLQYQSGF ITVFINGVLT EVPRGPLDMK AMFGQDVVLV HSSGVPVPIN EFGFLIQGLQ 240 HGESYFLVNT STN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17810.1	6e-36	WOX family protein