PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023878458.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WRKY

Protein Properties

Length: 313aa MW: 34563.8 Da PI: 5.8829

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023878458.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	104.2	6.9e-33	171	228	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +Dgy+WrKYGqK vk+s+fprsYYrCt ++C+vkk+vers++dp++v++tYeg+H h+ XP_023878458.1 171 EDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSDDPTIVITTYEGQHCHH 228 8******************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 313 aa Download sequence
MEEGDKSDPG TEFASDSSWP LGPHDSDNVY FFANNDRGGR RGEDDTTILS EFGWNLRPEN 60 NDPNPIGGLD DDASDFTRSF VFPDQNKDTT GSALQSSDPA VPSGSESKAG EATTSNNPSV 120 SSTSSEDPPE KSTGSGGKPP EIPNKVRKKG QKRIRQPRFA FMTKSEVDHL EDGYRWRKYG 180 QKAVKNSPFP RSYYRCTNSK CTVKKRVERS SDDPTIVITT YEGQHCHHTI GFPRGGIISQ 240 EAFAGQLAPP ISHFYYPTVH HQLPQENPFF ITQTRQTPGE AAGESRVMPQ TNALPPTDEG 300 LLGDIVPPNM RNR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69310.2	9e-74	WRKY family protein