PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023877685.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 320aa    MW: 36249.2 Da    PI: 8.0666
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023877685.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY105.62.6e-33184241259
                     --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s++prsYYrCts++C+vkk+ver+ +dp++v++tYeg+Hnh+
  XP_023877685.1 184 EDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCTVKKRVERNFQDPSIVITTYEGQHNHQ 241
                     8********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    
MSEEKKDLYH QDPFFYNQHE INQSSLFPFF NDNNPSVYNH PVTQTLQGFD PSFMTFTDCL  60
HGSMDYNTLS RAFDMSCNSP SGHQNHHLIT PIDTNLKKQA AMGDSAGASE NPSTPNSSVS  120
ASSSNEAAGE EESDKSKKDK QPQGCEEDGD EAKSKKANKP KKKEKRQREP RFAFLTKSEI  180
DHLEDGYRWR KYGQKAVKNS PYPRSYYRCT SQKCTVKKRV ERNFQDPSIV ITTYEGQHNH  240
QCPATLRGNA AGMLSPSLLA CASIRPSFPQ QLLTQFLPTN NQVDPNSMFY RNLSAQQQLQ  300
LPDYGLLQDL VPSFSNRQKP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1163168KEKRQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29860.18e-55WRKY family protein