PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023876848.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 293aa MW: 33060.3 Da PI: 6.7067

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023876848.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.7	1.7e-07	242	275	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + XP_023876848.1 242 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 275 469*****************************87 PP
2	ELK	24.2	7.6e-09	196	217	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++ ++++E++ XP_023876848.1 196 ELKIELKQGFKSKIEDVREEIL 217 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MQEPNLGMMG GGGSSGGLSG EVAISGDHLR QLKTEIATHP LYEQLLNAHV SCLRVATPID 60 QLPLIDAQLA QSHHLLRSYA SQHSHSLPPH ERQELDNFLA QYLLVLCSFK EQLQQHVRVH 120 AVEAVVACRE IENTLQALTG VSLGEGTGAT MSDDEDDLQM DFSLDQSGGD GHDMMGFGPL 180 LPTESERSLM ERVRQELKIE LKQGFKSKIE DVREEILRKR RAGKLPGDTT TVLKNWWQQH 240 SKWPYPTEDD KAKLVEETGL QLKQINNWFI NQRKRNWHSN SQSVTSLKSK RKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	273	293	RKRNWHSNSQSVTSLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-155	TALE family protein