PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023875608.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

CPP

Protein Properties

Length: 476aa MW: 53056.7 Da PI: 8.071

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023875608.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	43.4	6.8e-14	89	127	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 +kk+C+Ck+skClk+YCeCfa g +C+ CkC +C N+ e XP_023875608.1 89 RKKHCTCKHSKCLKLYCECFAGGIYCDG-CKCANCYNDVE 127 689***********************.******987 PP
2	TCR	50.8	3.2e-16	173	212	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgCnCkk+ ClkkYCeCf+a++ Cse+CkC dCkN e XP_023875608.1 173 KHNKGCNCKKTWCLKKYCECFQANVLCSENCKCVDCKNFE 212 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MEETENLDFP PKRPRSVGAT RKTVTEASVA FPRKNRIRQL DFTEFPVKPI SVVSHSHLPP 60 RIPLSTINSE SPRSRPQLNI NGSNDTPKRK KHCTCKHSKC LKLYCECFAG GIYCDGCKCA 120 NCYNDVENED VRIAAIEGIL ERNPSAFKPK IANSPLKTLD NRDEENVSPM VGKHNKGCNC 180 KKTWCLKKYC ECFQANVLCS ENCKCVDCKN FEGSEECLAV LHGDHSNTNT CIQQANAGLS 240 GAFDLPGNRF SPGLGKRKGH ELLDSKEKNS QIQKLTLHHK PMNPLSDSDP LSALSVYPVR 300 QVIGSPVLHS PKFRYRSLLA DVIQPEDTKK LCSCLVLVSE FAQIGADNNS ASGEQERGHS 360 DTASLLVGQD KENCQGEPET QKMPDSHLSS NGAATIGTDD FRSGLYMKHE RLVLKDFLSC 420 LKNLITFGHM KGVIPCHVIL NIEKYFNQMI VVIYLYFKTN IVTSSFLICD LFVLHF

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MEETENLDFP PKRPRSVGAT RKTVTEASVA FPRKNRIRQL DFTEFPVKPI SVVSHSHLPP  60
RIPLSTINSE SPRSRPQLNI NGSNDTPKRK KHCTCKHSKC LKLYCECFAG GIYCDGCKCA  120
NCYNDVENED VRIAAIEGIL ERNPSAFKPK IANSPLKTLD NRDEENVSPM VGKHNKGCNC  180
KKTWCLKKYC ECFQANVLCS ENCKCVDCKN FEGSEECLAV LHGDHSNTNT CIQQANAGLS  240
GAFDLPGNRF SPGLGKRKGH ELLDSKEKNS QIQKLTLHHK PMNPLSDSDP LSALSVYPVR  300
QVIGSPVLHS PKFRYRSLLA DVIQPEDTKK LCSCLVLVSE FAQIGADNNS ASGEQERGHS  360
DTASLLVGQD KENCQGEPET QKMPDSHLSS NGAATIGTDD FRSGLYMKHE RLVLKDFLSC  420
LKNLITFGHM KGVIPCHVIL NIEKYFNQMI VVIYLYFKTN IVTSSFLICD LFVLHF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	5e-94	CPP family protein