PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023875523.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

TALE

Protein Properties

Length: 725aa MW: 79293.3 Da PI: 6.8308

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023875523.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.1	7.2e-09	422	454	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 ++yp+ +++ LAk++gLt +qV++WF N R + XP_023875523.1 422 HPYPKDSDKVVLAKQTGLTRSQVSNWFINARVR 454 89*****************************88 PP
2	BELL	121.3	4.2e-39	279	350	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rqelq+kk+kL+++l+eV++rY+qy++q+++v+ssFe++aglgsa++Yt+lAl++iS++FrcLkd i++qi XP_023875523.1 279 QRQELQMKKTKLVTMLDEVEQRYRQYHHQMHIVVSSFEQAAGLGSARSYTALALQTISKQFRCLKDTISSQI 350 69*********************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence
MATYFHSEIQ ANPGSDGLHT LYLMNPNPNP NYVPYSDTQN QHSAPNILFL NPAASITNAL 60 NPSTLSHAPP QNQHLVGIPL APNNSNDPSR QSLLGQQEIP ALHAISAPRV HYNLWGPLMD 120 QAASVTVASS SGSGPEMGFR GLGPSLNQQQ QQGLSLSLSS QQTAFYNNRS VLSAGGGGGE 180 HDVPTSGEDL RVSGNSPSSV SAMSNGISGV QSVILGSKYL KAAQELLDDV VNVGNEIKVD 240 SMEGNKDKMK MNKESTAVIG DDPGESSGAK QGAELTTAQR QELQMKKTKL VTMLDEVEQR 300 YRQYHHQMHI VVSSFEQAAG LGSARSYTAL ALQTISKQFR CLKDTISSQI KATSKSLGED 360 QDCLGVKTEG GSRLKYVDQQ LRQQRALQQL GMLQHNAWRP QRGLPERAVS VLRAWLFDHF 420 LHPYPKDSDK VVLAKQTGLT RSQVSNWFIN ARVRLWKPMV EEMYLEEIKE HERNDSEDNI 480 NKRESNKEGS TTIAPADSTA ATRLDQMKAL QSKAENFTNQ MASDPNEISN SSSMSKSSMG 540 GSIQGHNSSG FHLVGLSDMQ RSPKKPRSTS EFQKYSPNNL LSMDMEMKPE ETSREISTSF 600 GSDQRQAKDD YSLISGTHGG GFGAYPIGDI GRFNPEQLAQ RFPGNAVSLT LGLPHCENLS 660 LSGTQQSYLT HQNIHMGRRL EMGTGETDFC GISTPQPSHS NTGYDNIDIQ NRKRFAAQLL 720 PDFVA

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence

MATYFHSEIQ ANPGSDGLHT LYLMNPNPNP NYVPYSDTQN QHSAPNILFL NPAASITNAL  60
NPSTLSHAPP QNQHLVGIPL APNNSNDPSR QSLLGQQEIP ALHAISAPRV HYNLWGPLMD  120
QAASVTVASS SGSGPEMGFR GLGPSLNQQQ QQGLSLSLSS QQTAFYNNRS VLSAGGGGGE  180
HDVPTSGEDL RVSGNSPSSV SAMSNGISGV QSVILGSKYL KAAQELLDDV VNVGNEIKVD  240
SMEGNKDKMK MNKESTAVIG DDPGESSGAK QGAELTTAQR QELQMKKTKL VTMLDEVEQR  300
YRQYHHQMHI VVSSFEQAAG LGSARSYTAL ALQTISKQFR CLKDTISSQI KATSKSLGED  360
QDCLGVKTEG GSRLKYVDQQ LRQQRALQQL GMLQHNAWRP QRGLPERAVS VLRAWLFDHF  420
LHPYPKDSDK VVLAKQTGLT RSQVSNWFIN ARVRLWKPMV EEMYLEEIKE HERNDSEDNI  480
NKRESNKEGS TTIAPADSTA ATRLDQMKAL QSKAENFTNQ MASDPNEISN SSSMSKSSMG  540
GSIQGHNSSG FHLVGLSDMQ RSPKKPRSTS EFQKYSPNNL LSMDMEMKPE ETSREISTSF  600
GSDQRQAKDD YSLISGTHGG GFGAYPIGDI GRFNPEQLAQ RFPGNAVSLT LGLPHCENLS  660
LSGTQQSYLT HQNIHMGRRL EMGTGETDFC GISTPQPSHS NTGYDNIDIQ NRKRFAAQLL  720
PDFVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35940.1	1e-120	TALE family protein