PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023874797.1

Organism

Quercus suber

Taxonomic ID

58331

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus

Family

WOX

Protein Properties

Length: 292aa MW: 32598.5 Da PI: 5.0738

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023874797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.7	5.6e-20	30	91	2	57
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L++l+++ r psae++++++++l +++ ++V++WFqN++a+e++ XP_023874797.1 30 STRWTPTTDQIRILKDLYYNngVRSPSAEQIQRISARLrqygKIEGKNVFYWFQNHKARERQ 91 58***************8678***********************************97 PP
2	Wus_type_Homeobox	114.3	6.1e-37	29	93	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ XP_023874797.1 29 SSTRWTPTTDQIRILKDLYYnNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKK 93 689*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 292 aa Download sequence
MEPQNQQQQQ EALNEDGSSG KGGYLCRTSS TRWTPTTDQI RILKDLYYNN GVRSPSAEQI 60 QRISARLRQY GKIEGKNVFY WFQNHKARER QKKRLNSDVP MQRGVGVGNT NWNNSPEESI 120 HTKYPLPNIT SGVSASSSSS GVISVGHMGN YGYGSVIMEK SFRDCSISNG GNNGGVGGSM 180 GQNFGCVGVD PYSSSYSTLF DKRRLMEENL GVQEEEEEEE EEDEEACEKE TLPLFPMHAE 240 DINGFCNMNP YTTNNGYNYT SCYRSADDGI SGSRTSLELS LNSYSHRSSP YH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	2e-41	WOX family protein