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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023873175.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
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Family | WRKY | ||||||||
Protein Properties | Length: 261aa MW: 29709.2 Da PI: 4.742 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 96 | 2.6e-30 | 53 | 111 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+ver+++d ++++itY+++Hnh+ XP_023873175.1 53 SDFWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERCRNDASMLIITYTSSHNHP 111 699***********************9988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MDDSLFPKLD KEVSRELKPE TQASKRRKMV QKTVVTVRIG ANVGKLKNEG PPSDFWSWRK 60 YGQKPIKGSP YPRGYYRCST SKGCSAKKQV ERCRNDASML IITYTSSHNH PGPDLSTTNL 120 IQLAEEPKTH STVDLQTTLK EEQQELAQEE EKQNEPTMTT KEKEPGEDHF LYIQSPISSS 180 QDIIVNQAED PFTVNLEKPH ETMGLVLDEE PLCYSQLMNF STPMSEENDF FDELEELPTS 240 SSFTSFMTSN FSEERIPVVP S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 1e-35 | WRKY family protein |