PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023870643.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family SBP
Protein Properties Length: 277aa    MW: 30058.2 Da    PI: 8.0253
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023870643.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP46.51e-1429584978
                    EEETTT--SS--S-STTTT-------S--- CS
             SBP 49 fhelsefDeekrsCrrrLakhnerrrkkqa 78
                    fh+l efDe+krsCr+rL++hn+rrrk+q+
  XP_023870643.1 29 FHSLGEFDEGKRSCRKRLDGHNRRRRKAQP 58
                    9**************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MISTCIHALP ASPKEFQKVQ EQETIFLGFH SLGEFDEGKR SCRKRLDGHN RRRRKAQPDS  60
LSLNSGRFHS SYQGTRILSF TSPHIFSQGA VVSSPWTGAV KAEPDAAGLY NSYSQLNYSD  120
RKNSINPGSL YDNYKGGKQF PFSQGSSSSL LGASISQPLL DANFASSNDS RSQKVFSNGL  180
NQVIDSDCAL SLLSSTPTET RQVGLSHMVQ SNPIHTGQSL VPSLHYNGFG MEVKENSSAL  240
GSSNNNIHCQ GMFSIGPHDS DGSSATGPNQ TLSFLWE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.13e-19SBP family protein