PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023870573.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 357aa    MW: 39677.8 Da    PI: 7.0062
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023870573.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY107.75.5e-34185243159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ldDgy+WrKYGqK vk+s++prsYYrCt++gC vkk+vers++dp++v++tYeg+H+h+
  XP_023870573.1 185 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTTGCGVKKRVERSSDDPSIVVTTYEGQHTHP 243
                     59********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    
MRKYMDNKKE ELKFENSMSN STFSDEIQGN SFAAFFDMPT CDQQGGGGGG GGDQKGFMEL  60
LGIPEYGQSL LDWFPTPSST TATTTTATAT TTTAATTTTM PPQQQPQEQP LPESSEVLNT  120
PATPNSSSIS SSSNEAANEE QIKAGHEEDQ DQEKTKKQLK PKKKNQKRQR EPRFAFMTKS  180
EVDHLDDGYR WRKYGQKAVK NSPYPRSYYR CTTTGCGVKK RVERSSDDPS IVVTTYEGQH  240
THPSPVTPRG SIGIMPEATA AGFGAMTSSF VIPQPQYQQQ HHHHHHLQQH PYMYSSQLPL  300
NISTSTTNLN SSSFPSFIQE RHLGTSSSAS LLRDHGLLQD IVPSQMIRKE PKEEYNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49520.15e-51WRKY family protein