PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023870447.1
Organism
Quercus suber
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Fagaceae; Quercus
Family WRKY
Protein Properties Length: 304aa    MW: 33939.1 Da    PI: 5.8816
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023870447.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.41.9e-30126184259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++prsYYrC+s+ gCp++k+vers+ dp+v++i Y++eHnh+
  XP_023870447.1 126 SDMWAWRKYGQKPIKGSPYPRSYYRCSSSkGCPARKQVERSHLDPEVFIINYSSEHNHS 184
                     79*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
MSDFACMEDW GLQAVVRGYI NEAPTTTLAN PKSCFAPLSG VEDDPFSFPE ISETATVLDE  60
LEKLYNPVLH PLSSQTMPVS SISVPKEAKE PEKQPSSKGK ATAYKKSRKN QHKRVVQHVT  120
AEGLCSDMWA WRKYGQKPIK GSPYPRSYYR CSSSKGCPAR KQVERSHLDP EVFIINYSSE  180
HNHSHPTRRN SLAGSTRSKF PTSKKKGKSS TSPTTPLMSS SIENEFVQST SIKIEELQQT  240
TVQDNEGNDI VIPDLDKELF PCVEDFDELA EEPALDVCFL DQLLEICPPW FIDNSISTTT  300
SHGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23550.13e-41WRKY family protein