PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026461010.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family SBP
Protein Properties Length: 378aa    MW: 41524.9 Da    PI: 9.1057
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026461010.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP126.69.5e-4080155277
                     -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
             SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                     C v+gC+adls +++yhrrhkvCe+hsk+p vl++g+eqrfCqqCsrfh+l efD++krsCr+rL++hn+rrrk +
  XP_026461010.1  80 CLVDGCTADLSLCRDYHRRHKVCEAHSKTPIVLINGQEQRFCQQCSRFHSLLEFDDGKRSCRKRLDGHNRRRRKCH 155
                     *************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MDWVFKPTSR NKDSSNVPIV RSSSIRGKQN STTTTTGDYS VDLNHQWQDP RVTIASSSSS  60
TLPSKKARTP PSNEAQIPSC LVDGCTADLS LCRDYHRRHK VCEAHSKTPI VLINGQEQRF  120
CQQCSRFHSL LEFDDGKRSC RKRLDGHNRR RRKCHTEPLN SGSIFSDNQG NSYLQFSNPQ  180
LFQSTTAGSS RHTMTAKDDT DLYGRGQYGD GQNQIPRSFS CNFNGGKQYP FFHGDDPALV  240
NHVGIPTIPF SQPHNTGATY SQSSKAGKKV LFSDGFNDRV VLDSNSASSL LSSPPTQPLS  300
RQSSGFGQAD IVHTNTIPPM AHPLAGGSLQ LDGLLGFGRY QSQGLEGEPP SLNSSRSRGI  360
FHLGLDGSME HGAFSWKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50670.18e-44SBP family protein