PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026461010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | SBP | ||||||||
Protein Properties | Length: 378aa MW: 41524.9 Da PI: 9.1057 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 126.6 | 9.5e-40 | 80 | 155 | 2 | 77 |
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 C v+gC+adls +++yhrrhkvCe+hsk+p vl++g+eqrfCqqCsrfh+l efD++krsCr+rL++hn+rrrk + XP_026461010.1 80 CLVDGCTADLSLCRDYHRRHKVCEAHSKTPIVLINGQEQRFCQQCSRFHSLLEFDDGKRSCRKRLDGHNRRRRKCH 155 *************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 378 aa Download sequence |
MDWVFKPTSR NKDSSNVPIV RSSSIRGKQN STTTTTGDYS VDLNHQWQDP RVTIASSSSS 60 TLPSKKARTP PSNEAQIPSC LVDGCTADLS LCRDYHRRHK VCEAHSKTPI VLINGQEQRF 120 CQQCSRFHSL LEFDDGKRSC RKRLDGHNRR RRKCHTEPLN SGSIFSDNQG NSYLQFSNPQ 180 LFQSTTAGSS RHTMTAKDDT DLYGRGQYGD GQNQIPRSFS CNFNGGKQYP FFHGDDPALV 240 NHVGIPTIPF SQPHNTGATY SQSSKAGKKV LFSDGFNDRV VLDSNSASSL LSSPPTQPLS 300 RQSSGFGQAD IVHTNTIPPM AHPLAGGSLQ LDGLLGFGRY QSQGLEGEPP SLNSSRSRGI 360 FHLGLDGSME HGAFSWKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50670.1 | 8e-44 | SBP family protein |