PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026459907.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | LBD | ||||||||
Protein Properties | Length: 117aa MW: 13210.8 Da PI: 4.1258 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 48 | 3.6e-15 | 1 | 56 | 45 | 100 |
DUF260 45 llkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallkee 100 +l++lp ++r++a++++ eA +r++dPvyG+vg+i++lqqq+ +++ela+++ e XP_026459907.1 1 MLQRLPVSQRSEAADCMSLEATWRVQDPVYGCVGIISQLQQQILMVQSELAKTQGE 56 7899***********************************************99876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 117 aa Download sequence |
MLQRLPVSQR SEAADCMSLE ATWRVQDPVY GCVGIISQLQ QQILMVQSEL AKTQGEIAFH 60 NAQQQQQTQL AQEPIIGGTQ WLFQFGQPSS SSTNINVNQE DMISNLDQQP FLDFLNR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26620.1 | 4e-18 | LBD family protein |