PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026459672.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 757aa MW: 87263.4 Da PI: 7.0791

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026459672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	46.9	9.4e-15	11	94	1	88
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +fY++++k +GF v+ks s ++ g+i ++tf+C + gk ++ +++ + r++a+ ++gC+a+l++++ +++++l+le nHe XP_026459672.1 11 EFYKAFGKATGFPVVKSISVTN-AAGHIRSYTFTCARAGKCNSVSEN---TLRPQATIKCGCQANLVLRLYFLVGYVISQLNLEYNHE 94 6**************99998.7788**********999888...999********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 757 aa Download sequence
MGFESIDDAW EFYKAFGKAT GFPVVKSISV TNAAGHIRSY TFTCARAGKC NSVSENTLRP 60 QATIKCGCQA NLVLRLYFLV GYVISQLNLE YNHEKNPENA RYFRCNRFIN SRVKKQLDLL 120 DQSAGRLCKG YDVCVNEAGG HENMTCSKKD CRNLIDNLRN SRLGEGDAVV ILTYFAKMTS 180 EGSGFYSSVD VDETGHLRSV FWADGRSREE YKEFGEVISF DTTYLVNRYD MSFAPFVGVN 240 HHRESILLGC GLVTHENEDS FVWLFMKWLD CMSGCAPPAI ITDQAKAMQN AIEIVFPNSI 300 HRSETKWMEM LQKYELLEKE WLRGLYEERR RWVPCYLNDI FWAGMQSTQR SESMNSFFDG 360 YLGTKTTLKQ FVEQYERASR DKEENETSAD AESCSKLIPT ATFFEMENQM QGMYTLSRFK 420 EFQNELTSKM YCELIKQEED PLGTFKYVTR VNVWIEGVDH QRIQIQMNFD VIFYSNECEV 480 SCSCRMFEFE GILYRHVLNV LILHGVKLVP DKYIKERWRK DLKRSHTSMK VNMGFWRNTV 540 EHDRCNNLSI LFSEVADMAV KSEPTFNDVN QLLALQLKLL KKNNAIQIEA KTPEVQEKHS 600 ARDEIMDIVP MDVVDVLNPN DRIMLGRPRT NTYKTIWKHT KKNPTTNNNG NACNEDVLVV 660 VDVPIPKTKK RGRPLGSKNK NVQVVLQQEY NGIAPPSHLY PQVPMCQYNG VVGQTHQYQA 720 NLLAPQVPMY QPWGFYQHPP PPMPMGLNGY NYQTAEV

Sequence ? help Back to Top

Protein Sequence Length: 757 aa Download sequence

MGFESIDDAW EFYKAFGKAT GFPVVKSISV TNAAGHIRSY TFTCARAGKC NSVSENTLRP  60
QATIKCGCQA NLVLRLYFLV GYVISQLNLE YNHEKNPENA RYFRCNRFIN SRVKKQLDLL  120
DQSAGRLCKG YDVCVNEAGG HENMTCSKKD CRNLIDNLRN SRLGEGDAVV ILTYFAKMTS  180
EGSGFYSSVD VDETGHLRSV FWADGRSREE YKEFGEVISF DTTYLVNRYD MSFAPFVGVN  240
HHRESILLGC GLVTHENEDS FVWLFMKWLD CMSGCAPPAI ITDQAKAMQN AIEIVFPNSI  300
HRSETKWMEM LQKYELLEKE WLRGLYEERR RWVPCYLNDI FWAGMQSTQR SESMNSFFDG  360
YLGTKTTLKQ FVEQYERASR DKEENETSAD AESCSKLIPT ATFFEMENQM QGMYTLSRFK  420
EFQNELTSKM YCELIKQEED PLGTFKYVTR VNVWIEGVDH QRIQIQMNFD VIFYSNECEV  480
SCSCRMFEFE GILYRHVLNV LILHGVKLVP DKYIKERWRK DLKRSHTSMK VNMGFWRNTV  540
EHDRCNNLSI LFSEVADMAV KSEPTFNDVN QLLALQLKLL KKNNAIQIEA KTPEVQEKHS  600
ARDEIMDIVP MDVVDVLNPN DRIMLGRPRT NTYKTIWKHT KKNPTTNNNG NACNEDVLVV  660
VDVPIPKTKK RGRPLGSKNK NVQVVLQQEY NGIAPPSHLY PQVPMCQYNG VVGQTHQYQA  720
NLLAPQVPMY QPWGFYQHPP PPMPMGLNGY NYQTAEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	3e-95	FAR1 family protein