PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026459342.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

ARR-B

Protein Properties

Length: 603aa MW: 67222.6 Da PI: 6.4659

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026459342.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	90.2	1.8e-28	160	213	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ eLH++Fv+av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_026459342.1 160 KTRVVWSIELHQQFVSAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 213 68*****************.******************************8 PP
2	Myb_DNA-binding	40.6	5.7e-13	162	212	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ XP_026459342.1 162 RVVWSIELHQQFVSAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 212 678***********************************************7 PP
3	Response_reg	59.2	2.2e-20	7	93	23	109
CEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 23 yeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109 y +v++++++ +al ll+e++ +Dl+l D+ mp+mdG++ll+ i e +lp+i++++ +++e + + + Ga d+l Kp+ +e++ + XP_026459342.1 7 Y-KVTTCSQAVAALSLLRERKymFDLVLSDVHMPDMDGFKLLELIGLEM-DLPVIMMSMDDKKEVVMKGVTHGACDYLIKPIRMEAIKN 93 6.99***********999999******************6644.8*******************************99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MLQMCLYKVT TCSQAVAALS LLRERKYMFD LVLSDVHMPD MDGFKLLELI GLEMDLPVIM 60 MSMDDKKEVV MKGVTHGACD YLIKPIRMEA IKNIWQHVIR KRRHELKELE RTASVEDTER 120 LQKPIEDADN ASSANEESYK NKRKDEEDDD DKDDNSTVKK TRVVWSIELH QQFVSAVNQL 180 GIDKAVPKKI LELMNVPGLT RENVASHLQK YRLYLKRVSG GTQNGFSPPF VGSPNTSYGS 240 LPSLSDFNLQ TFTVSGQLQN FASRQAGIIK SAGHGGLNMH IDSQRSMFSG ELARPRFGAR 300 HQVNNNAQVP FLSGLPSPIG HTPPLTNTHQ QPLRSFGNMG LQSNGSSTCF VNHATGFHGT 360 GFPTQLDLLR SSDSSVMMQM PQSQLKGKFI SNDVSRQFPT GNGILINGRG TTPNQIFLAS 420 SLVNFPTNLA PELTGHGYPL GNSTRVSCLQ QVGTFENEGS SEAKRLSGFN PSYDILADLR 480 QNIAESSDFH DGVLNCETSQ NSSVARVCNV QSLQVLGQQG FLSNQINENR EEQRHEVPKN 540 PQENENFDAK AEYMPELDTK NFGLSRNWSQ DDLMSELFKQ QDGVGMINTR HNFDSFPLDN 600 ISV

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MLQMCLYKVT TCSQAVAALS LLRERKYMFD LVLSDVHMPD MDGFKLLELI GLEMDLPVIM  60
MSMDDKKEVV MKGVTHGACD YLIKPIRMEA IKNIWQHVIR KRRHELKELE RTASVEDTER  120
LQKPIEDADN ASSANEESYK NKRKDEEDDD DKDDNSTVKK TRVVWSIELH QQFVSAVNQL  180
GIDKAVPKKI LELMNVPGLT RENVASHLQK YRLYLKRVSG GTQNGFSPPF VGSPNTSYGS  240
LPSLSDFNLQ TFTVSGQLQN FASRQAGIIK SAGHGGLNMH IDSQRSMFSG ELARPRFGAR  300
HQVNNNAQVP FLSGLPSPIG HTPPLTNTHQ QPLRSFGNMG LQSNGSSTCF VNHATGFHGT  360
GFPTQLDLLR SSDSSVMMQM PQSQLKGKFI SNDVSRQFPT GNGILINGRG TTPNQIFLAS  420
SLVNFPTNLA PELTGHGYPL GNSTRVSCLQ QVGTFENEGS SEAKRLSGFN PSYDILADLR  480
QNIAESSDFH DGVLNCETSQ NSSVARVCNV QSLQVLGQQG FLSNQINENR EEQRHEVPKN  540
PQENENFDAK AEYMPELDTK NFGLSRNWSQ DDLMSELFKQ QDGVGMINTR HNFDSFPLDN  600
ISV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	1e-106	ARR-B family protein