PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026458202.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

Trihelix

Protein Properties

Length: 560aa MW: 62910 Da PI: 9.3525

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026458202.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	50.4	6e-16	48	118	2	73
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 Wt +e +L++ ++ +++r+ ++W+ +s+k+ + g+ rs+ qC kwe+l +ykkik++e+kr XP_026458202.1 48 WTTEELITLVTEAVAIDAAFSRALPSIQKWKMISDKCTALGVGRSSDQCHRKWESLLVDYKKIKDWESKR-G 118 ********************************************************************97.3 PP

Sequence ? help Back to Top
Protein Sequence Length: 560 aa Download sequence
MKETEQAGDP QTFETPEKQK LRRGSRKRGS NSQVVSSRIT RSRLAADWTT EELITLVTEA 60 VAIDAAFSRA LPSIQKWKMI SDKCTALGVG RSSDQCHRKW ESLLVDYKKI KDWESKRGLA 120 SYWSLEKERK MEHELPISFD AELFKCLDES LKLQGYQSES DHGGSESEAE VEKLNDITIS 180 DLKKQSGSTQ GRQKSKRGPP KSKITETAKE QGKITVSVEQ EGNVVETAEN ESIVAEAAVK 240 KGRVGRPKVK ITETTEHNGD VTEATEQIGG ITQPAEEEGK AIEETVRKHR FGRPKTKVTE 300 TAEEEGKAID ETVQKRRFGR PKTKVTEMAE EEVNEEEGKA IDETVQKRRF GRPKTKVTET 360 AEEEGKVTEA AVQKQRFGRP KTKVTEPAEQ KGDRTVRAEQ ESKAIETAVQ KGRVSGTKRK 420 STDTMSEQKG KETETAEENG KSTKVDVQKR VGRPKSKVIE MTQKTRADVE LIHAILRGDL 480 NPKDIDLNEP RNPGMLQTET GDEVLVQVGT LQRKLLHPGV HVHSQKYCPC TFRWPTHLQK 540 QKSKSKIYCV MVTMVRIGEC

Sequence ? help Back to Top

Protein Sequence Length: 560 aa Download sequence

MKETEQAGDP QTFETPEKQK LRRGSRKRGS NSQVVSSRIT RSRLAADWTT EELITLVTEA  60
VAIDAAFSRA LPSIQKWKMI SDKCTALGVG RSSDQCHRKW ESLLVDYKKI KDWESKRGLA  120
SYWSLEKERK MEHELPISFD AELFKCLDES LKLQGYQSES DHGGSESEAE VEKLNDITIS  180
DLKKQSGSTQ GRQKSKRGPP KSKITETAKE QGKITVSVEQ EGNVVETAEN ESIVAEAAVK  240
KGRVGRPKVK ITETTEHNGD VTEATEQIGG ITQPAEEEGK AIEETVRKHR FGRPKTKVTE  300
TAEEEGKAID ETVQKRRFGR PKTKVTEMAE EEVNEEEGKA IDETVQKRRF GRPKTKVTET  360
AEEEGKVTEA AVQKQRFGRP KTKVTEPAEQ KGDRTVRAEQ ESKAIETAVQ KGRVSGTKRK  420
STDTMSEQKG KETETAEENG KSTKVDVQKR VGRPKSKVIE MTQKTRADVE LIHAILRGDL  480
NPKDIDLNEP RNPGMLQTET GDEVLVQVGT LQRKLLHPGV HVHSQKYCPC TFRWPTHLQK  540
QKSKSKIYCV MVTMVRIGEC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	3e-31	Trihelix family protein