PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026458201.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 563aa MW: 63268.2 Da PI: 9.2251 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 50.3 | 6.1e-16 | 48 | 118 | 2 | 73 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrts 73 Wt +e +L++ ++ +++r+ ++W+ +s+k+ + g+ rs+ qC kwe+l +ykkik++e+kr XP_026458201.1 48 WTTEELITLVTEAVAIDAAFSRALPSIQKWKMISDKCTALGVGRSSDQCHRKWESLLVDYKKIKDWESKR-G 118 ********************************************************************97.3 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 563 aa Download sequence |
MKETEQAGDP QTFETPEKQK LRRGSRKRGS NSQVVSSRIT RSRLAADWTT EELITLVTEA 60 VAIDAAFSRA LPSIQKWKMI SDKCTALGVG RSSDQCHRKW ESLLVDYKKI KDWESKRGLA 120 SYWSLEKERK MEHELPISFD AELFKCLDES LKLQGYQSES DHGGSESEAE VEKLNDITIS 180 DLKKQSGSTQ GRQKSKRGPP KSKITETAKE QGKITVSVEQ EGNVVETAEN ESIVAEAAVK 240 KGRVGRPKVK ITETTEHNGD VTEATEQIGG ITQPAEEEGK AIEETVRKHR FGRPKTKVTE 300 TAEEEGKAID ETVQKRRFGR PKTKVTEMAE EEVNEEEGKA IDETVQKRRF GRPKTKVTET 360 AEEEGKVTEA AVQKQRFGRP KTKVTEPAEQ KGDRTVRAEQ ESKAIETAVQ KGRVSGTKRK 420 STDTMSEQKG KETETAEENG KSTKVDVQKR VGRPKSKVIE MTQKTRADVE LIHAILRGDL 480 NPKDIDLNEP RNPGMLQTET GDEVLVQVGT LQRKLLHPGV HVHSQKYCPC TFRWPTHLQK 540 QKSKSKIYCV MEMCGQDARV DNK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G31270.1 | 4e-31 | Trihelix family protein |