PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026457911.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family FAR1
Protein Properties Length: 296aa    MW: 33382 Da    PI: 7.9075
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026457911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR155.42e-1743125190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     kfY+eYA++vGFs++k++++++  +g     tf Csk+ +++++k++      ++   +  C+a ++ k+ek ++w+++  +leHnH++ 
  XP_026457911.1  43 KFYQEYASRVGFSIVKRSTRNN-GDGILRGVTFACSKHLSKSRRKTT------ENGIVQSRCDAYITAKLEKCEHWRISVASLEHNHKCD 125
                     6**************9987776.9999***********999998877......899999****************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MMNDSSKESD SNENLENQYS LKSKKLKHPV VGVTFHRWGD MLKFYQEYAS RVGFSIVKRS  60
TRNNGDGILR GVTFACSKHL SKSRRKTTEN GIVQSRCDAY ITAKLEKCEH WRISVASLEH  120
NHKCDPSKFS SKRCVHRHIE SLERKIHLNI PADIATNVDP DVVCCCGDEP VGCIILKHVS  180
DSVNESSSAR LGRGDATTLI RFFQKMVGEN AGFYFVLDVD DVGQLKSVFW VDGMSREAYK  240
EFGEVVSFDT SYLVKEYEIL FASFIGVNHH GQTILLGCGL LWIESLKHLC GYLVNG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G52520.13e-35FAR1 family protein