PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026457660.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

SBP

Protein Properties

Length: 483aa MW: 54118.7 Da PI: 7.2608

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026457660.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	127.6	4.9e-40	207	284	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+++l++ak+yhrrhkvCe+hska++v++ g+eqrfCqqCsrfh l efDe+krsCr+rLa+hn+rrrk+++ XP_026457660.1 207 RCQAEGCNVELTHAKHYHRRHKVCEFHSKATKVVAGGIEQRFCQQCSRFHVLAEFDESKRSCRKRLADHNRRRRKPHQ 284 6**************************************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MMNKYISNGD GDNEICNTNN PSMVSFVGLD TNNQKHFGEW ETNNIASHHQ QHHHHQPTAT 60 NNNNHNTVNP NFLNSSSTTN NNIFENFNNN FLSTTPHSST LFPSNNFFSS TSSSSTCNNN 120 NNSTQFLDFP PSSSTSTNFF LKNKPQLNSS SSFDGSGLYY NSINNDYRRI GLNLGHRTYF 180 SSRESTMMLD RLVRRPRGFY LENQVPRCQA EGCNVELTHA KHYHRRHKVC EFHSKATKVV 240 AGGIEQRFCQ QCSRFHVLAE FDESKRSCRK RLADHNRRRR KPHQPSGPYN ETSSSSSAVK 300 PVASENETGN LQMGSSSSRS SSELVAAYDP NSNQQQDMSL SSSSATLSLM IPKCTTNNNN 360 HKSIPTTKAA DTSSLMTHFI SNSCSPPSSG PHHSPHEHNP SQPFISTEAN SPSAVSLSSY 420 QNLFFPNVNS NERHHREEDD HEELTLQQSA GDQHGASTTS EIDHEDLHNL LHLRQAMFGV 480 EFV

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MMNKYISNGD GDNEICNTNN PSMVSFVGLD TNNQKHFGEW ETNNIASHHQ QHHHHQPTAT  60
NNNNHNTVNP NFLNSSSTTN NNIFENFNNN FLSTTPHSST LFPSNNFFSS TSSSSTCNNN  120
NNSTQFLDFP PSSSTSTNFF LKNKPQLNSS SSFDGSGLYY NSINNDYRRI GLNLGHRTYF  180
SSRESTMMLD RLVRRPRGFY LENQVPRCQA EGCNVELTHA KHYHRRHKVC EFHSKATKVV  240
AGGIEQRFCQ QCSRFHVLAE FDESKRSCRK RLADHNRRRR KPHQPSGPYN ETSSSSSAVK  300
PVASENETGN LQMGSSSSRS SSELVAAYDP NSNQQQDMSL SSSSATLSLM IPKCTTNNNN  360
HKSIPTTKAA DTSSLMTHFI SNSCSPPSSG PHHSPHEHNP SQPFISTEAN SPSAVSLSSY  420
QNLFFPNVNS NERHHREEDD HEELTLQQSA GDQHGASTTS EIDHEDLHNL LHLRQAMFGV  480
EFV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	265	282	KRSCRKRLADHNRRRRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	2e-52	SBP family protein