PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026457492.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 761aa MW: 86703.5 Da PI: 6.3439

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026457492.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.9	9.1e-20	62	155	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+++Ak++GFs+r+++++ + + it+r+f+C + g+++ + +++ k +r+r+++r+gC a l++ ++ +w++t + + HnHel XP_026457492.1 62 EFYCSFAKQCGFSIRRHRTRGKdGVGRGITRRDFTCHRGGYPQLKPSEDGKLQRNRKSSRCGCPAYLRIVRRAdfdVPEWRITGFTNTHNHELL 155 6*************999887455667****************9***************99987676789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 761 aa Download sequence
MSEGGTNLVL ETSGNEIDLS PEDTGTIEEI REAESAVLLH QTSVNLVPAI GQRFVSQDAA 60 YEFYCSFAKQ CGFSIRRHRT RGKDGVGRGI TRRDFTCHRG GYPQLKPSED GKLQRNRKSS 120 RCGCPAYLRI VRRADFDVPE WRITGFTNTH NHELLKSNEV RLLPAYCTLS ADDKSRICMF 180 AKAGMSVRQM LRLMELEKGV KLGNLPFTEI DVRNLLQSFR NVDRDNDAID LLSMCKNIKD 240 DDPDFKYDFK IGTNNRLECI AWSYSSSLRQ YEDFRDVLVF DTTHRLEAYD MLIGIWIGVD 300 NHGMNCFFGC VLLRDENMQS FSWALKTFLG FVKGVAPQAI LTDQNIWLKD AISIEMPSTK 360 HAFCIWHIIA KFSDWFSPLL GSAYDAWRAE FHQLYKSDTV DDFEVGWTEM TNTYGLHGNK 420 HIASLHALRM YWALPFLRSY FFAGMTSTFQ PEKINTFIQR LLGAQSELDH FVEQVSVIAD 480 FRDQVGAKIK MQGKLNKVSL KTGSPIESHV ATVFTPYAFC KLQEELVSAP QYASFQMEQD 540 CFHVRHHTRA DGGRKVMWVP SEELISCSCH QFEFSGILCR HILRILSTNN CFHIPDQYLP 600 NRWRRTNSIC RKSPCTTATT VENGERFQKL QSMVSSLMAE AVETEDCLEF ACDQISMVLS 660 RIKGIPNLSH HETDVTYDGP SDPLILPEVE DDDDGIIQGF TSVSAHENFG KANDKRMKDG 720 FEFPKKRRRC TLPWCGQFGH DAVDCPMVEG DGLNGDELGF L

Sequence ? help Back to Top

Protein Sequence Length: 761 aa Download sequence

MSEGGTNLVL ETSGNEIDLS PEDTGTIEEI REAESAVLLH QTSVNLVPAI GQRFVSQDAA  60
YEFYCSFAKQ CGFSIRRHRT RGKDGVGRGI TRRDFTCHRG GYPQLKPSED GKLQRNRKSS  120
RCGCPAYLRI VRRADFDVPE WRITGFTNTH NHELLKSNEV RLLPAYCTLS ADDKSRICMF  180
AKAGMSVRQM LRLMELEKGV KLGNLPFTEI DVRNLLQSFR NVDRDNDAID LLSMCKNIKD  240
DDPDFKYDFK IGTNNRLECI AWSYSSSLRQ YEDFRDVLVF DTTHRLEAYD MLIGIWIGVD  300
NHGMNCFFGC VLLRDENMQS FSWALKTFLG FVKGVAPQAI LTDQNIWLKD AISIEMPSTK  360
HAFCIWHIIA KFSDWFSPLL GSAYDAWRAE FHQLYKSDTV DDFEVGWTEM TNTYGLHGNK  420
HIASLHALRM YWALPFLRSY FFAGMTSTFQ PEKINTFIQR LLGAQSELDH FVEQVSVIAD  480
FRDQVGAKIK MQGKLNKVSL KTGSPIESHV ATVFTPYAFC KLQEELVSAP QYASFQMEQD  540
CFHVRHHTRA DGGRKVMWVP SEELISCSCH QFEFSGILCR HILRILSTNN CFHIPDQYLP  600
NRWRRTNSIC RKSPCTTATT VENGERFQKL QSMVSSLMAE AVETEDCLEF ACDQISMVLS  660
RIKGIPNLSH HETDVTYDGP SDPLILPEVE DDDDGIIQGF TSVSAHENFG KANDKRMKDG  720
FEFPKKRRRC TLPWCGQFGH DAVDCPMVEG DGLNGDELGF L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein