PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_026456984.1
Organism
Papaver somniferum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
Family Trihelix
Protein Properties Length: 665aa    MW: 75460 Da    PI: 6.6555
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_026456984.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix43.86.9e-14123187271
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 
                     W k+evlaL+++r++m++ +++       W +vs+k++e g++rsp++Ckek e++n++   ++ + +  
  XP_026456984.1 123 WEKEEVLALLRIRSSMGHGFSDF-----IWGHVSRKLAELGYKRSPERCKEKYEEMNQYSNDTTPTPNYS 187
                     ********************998.....9****************************9877666666554 PP
2trihelix93.71.7e-29513602186
        trihelix   1 rWtkqevlaLiearremeerlrrg.....klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     rW+++ev  Li++r ++++++++g     + k plWe++s+ m+e g++rs+k+Ckekwen+nk+++k+k+++kkr s +s+tcpyf+ql+
  XP_026456984.1 513 RWPRDEVYSLINLRCNLGNSSSNGgedkeNTKIPLWEKISQGMSELGYKRSAKKCKEKWENINKYFRKTKDTNKKR-SLDSKTCPYFHQLN 602
                     8*******************9975333336999******************************************8.999*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 665 aa     Download sequence    
MFNGVPEQFH QFIASRTTTP LPLSHPLTLP LHVSPSPPPP TFSNFIDPQQ QLSRQHLQQH  60
QLYQQQSHLL HQLHQQQQQQ SASTVQQVMV HHHHQQRQDE GKEDEEEQLR ERVRSVSEMG  120
DPWEKEEVLA LLRIRSSMGH GFSDFIWGHV SRKLAELGYK RSPERCKEKY EEMNQYSNDT  180
TPTPNYSSSG KNYSRSFSEL EALFEDHHQN PKTTTTNTLA VDNEDEKNNM VRSSNDNAGG  240
DDDSQGKMGL NMEENSGYET LENPFVENVV KKQTRSKKRK RHDHKLELLK GLCEEIVNKI  300
MNQQEELHKK LLQDMERKEE ERVTREEIWK KKEMDRVSKE IEMRAKEQAI ACDRETTIIE  360
FLKKFTSSIS SSSSQNNQDD LSLKIENIIK TSSRNPTSSS SPSIILSSSE NPKSAISSVQ  420
VPTTQNTPKV PTSSSHVATA TNRTPSPTHS NQKIPNLSHL DLVSENPNSI ITTQNNNQGD  480
ATSSSTTTAA AITVSSQEPG STSNNDREEN GKRWPRDEVY SLINLRCNLG NSSSNGGEDK  540
ENTKIPLWEK ISQGMSELGY KRSAKKCKEK WENINKYFRK TKDTNKKRSL DSKTCPYFHQ  600
LNTLYNQGRL TLPSDGPDNQ SSAGNSTENH PESSERVVNG SKEEGAGDEK NNNSAQVSAP  660
LEFEY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1561569KRSAKKCKE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.14e-73Trihelix family protein