PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_026456978.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
|
||||||||
Family | CPP | ||||||||
Protein Properties | Length: 775aa MW: 85277.2 Da PI: 6.9991 | ||||||||
Description | CPP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCR | 50.2 | 5.2e-16 | 479 | 517 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 ++k+CnCkkskClk+YCeCfaag++C e C+C dC+Nk XP_026456978.1 479 SCKRCNCKKSKCLKLYCECFAAGVYCVEPCSCLDCFNKP 517 689**********************************96 PP | |||||||
2 | TCR | 52 | 1.4e-16 | 561 | 599 | 1 | 39 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++kkgCnCkks+ClkkYCeCf+ g+ Cs +C+Ce+CkN XP_026456978.1 561 RHKKGCNCKKSSCLKKYCECFQGGVGCSINCRCEGCKNA 599 589***********************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 775 aa Download sequence |
MDTPERNRIC TPKSKFEDSP VFNYLNSLSP IKSVRSANIS QTFNSLSFSS PPSVFTSPHV 60 SSQKESRFLR RNFFSDSAKS GLASENGNDG NTRVTDAETA EIFNCSADPP QNPDSRSGTK 120 EVHLPNESLE LAIELPRKLK YGCESPESNP VPRHRYGTDS VREITGTSSS LRQFVQPSLE 180 RCSCPKNGVE VQEISQLEQK NDEEEGSDWE NMISDAAGLL VLDPSNDAEA TKEQLNPNIS 240 FLNSQAPDLP QEGLPKPQSG CLENDNLGTA EGTVQKNTNC TPQKLQSTSR SKKQVKFHNE 300 KVDDKAEKDC KQQRGTRRRC LLFEMGGGQK RRLVDDSKSG SSSSPSDGKV TSEDRQLVPF 360 KAGNNSSPCM VPGIGLHLNA LAVSGKDNRV VKQENLPSGK SLISMSSHIT SLHTVESELQ 420 PLNKTFSLSS LERDIVPAVS EDQVMQDAYQ ASVFGVSEEF ESGSPRKRRR RYENGGDESC 480 KRCNCKKSKC LKLYCECFAA GVYCVEPCSC LDCFNKPIHE DTVLATRKQI ESRNPLAFAP 540 KVISHVAEIG EETYKTPASA RHKKGCNCKK SSCLKKYCEC FQGGVGCSIN CRCEGCKNAF 600 GTKDGYVPSG EEIEPEGEES ESSEKNNTRK SLQISEVHND IEEQYPDHVT PITPFQICRM 660 SVQLEFSSSS GKPPRPSIFP VGSSPRLLSN HIQQISGVLP TPLKLEKQFQ IAAPEDETPE 720 FLKGRNSSPI SGVKTASPNG KRVSPPHGKS TRKLVLQSIP SFPSLTFHDQ TDDHQ |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 466 | 470 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G14770.1 | 1e-107 | CPP family protein |