PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456807.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 895aa MW: 101603 Da PI: 7.2803

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456807.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.6	6.5e-26	51	138	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA++vGFs+rks+s+++ ++++ +r f+Cskeg +e+++ ++r +trt+Cka+l+++ ++dg + v++++leHnHel+p XP_026456807.1 51 DFYNRYARSVGFSIRKSSSTHR-SDKTVSRRIFCCSKEGVYREHSRG--APMKPRLQTRTDCKARLVIRIQDDGSYSVAEFVLEHNHELVP 138 6**************99987.7778**********999988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 895 aa Download sequence
MDKKSTKSPI ELNETFQTGG NILMETDIGV SKDIEVPKLG MIFQSDDEAY DFYNRYARSV 60 GFSIRKSSST HRSDKTVSRR IFCCSKEGVY REHSRGAPMK PRLQTRTDCK ARLVIRIQDD 120 GSYSVAEFVL EHNHELVPPS EVHILRSHRK MREAQTGMFN NLQLVGTGAT GFYSYMSAED 180 GKTHNLSFTQ VDSSNHLDKR SKNILMGDVQ IMLDYFNCMQ KENPYFFYSI QMDSNNQICG 240 CFWSDAKSRI DYSFFSDVVW VETTFRTSDY DKPCALFVGV NNHGQAIPFG CALLWEETAE 300 SFVWLFQTFL EAMNGKPPES IFTDQAPQIS DAVGRVLPNS HHRLCPWHIY ENALRHLSDV 360 FEQHKSFAQD FKSCICGNET EEEFQFCWDA LVKKYNLAEN KWVQDLYLLR EKWAQVYGQE 420 YFCAGITNTQ RSEGMNFVKK YFKRTLTLRE FVAQYEKAVA SRREKEKNQD SVSRQTKPDL 480 RIAWPAVVQA AERYTTKIFT LFQEEYVRTL DLFVESLGED GTVCTYRVSS FENIKPRTVT 540 FNSSDNSVKC CCKKFEIMGI LCAHALKILH TRRLPDLPLQ YYLNRWTRDA RAGAVVDDFR 600 KSLPVNCRSS LTLRYADLAY MSLTIAVKGS STENSSGFTK VLLVQVLEEL DNFLKFDSDQ 660 GRFFEDMRNA NHEKVSRERV VDHSCADTVS RKKAKDKASG KIKSPLGKGK KRDNTQLQPT 720 GTDGQVGHVS VGATTTTSGP LMVSVPSSVP FYPARPWNLP HYSQGSIEQV EQATVTRSEN 780 DSTQCRIMSG GWSGPPSCPS EMLPPNVMGC PDTSDPHRLS FHAAGPSTLP QMPCIYPHVY 840 TEESNRLVDQ TMLQDGAGSN NQSNQGFIGF LSQRSNPHRL SESSMPQDIL DPPAP

Sequence ? help Back to Top

Protein Sequence Length: 895 aa Download sequence

MDKKSTKSPI ELNETFQTGG NILMETDIGV SKDIEVPKLG MIFQSDDEAY DFYNRYARSV  60
GFSIRKSSST HRSDKTVSRR IFCCSKEGVY REHSRGAPMK PRLQTRTDCK ARLVIRIQDD  120
GSYSVAEFVL EHNHELVPPS EVHILRSHRK MREAQTGMFN NLQLVGTGAT GFYSYMSAED  180
GKTHNLSFTQ VDSSNHLDKR SKNILMGDVQ IMLDYFNCMQ KENPYFFYSI QMDSNNQICG  240
CFWSDAKSRI DYSFFSDVVW VETTFRTSDY DKPCALFVGV NNHGQAIPFG CALLWEETAE  300
SFVWLFQTFL EAMNGKPPES IFTDQAPQIS DAVGRVLPNS HHRLCPWHIY ENALRHLSDV  360
FEQHKSFAQD FKSCICGNET EEEFQFCWDA LVKKYNLAEN KWVQDLYLLR EKWAQVYGQE  420
YFCAGITNTQ RSEGMNFVKK YFKRTLTLRE FVAQYEKAVA SRREKEKNQD SVSRQTKPDL  480
RIAWPAVVQA AERYTTKIFT LFQEEYVRTL DLFVESLGED GTVCTYRVSS FENIKPRTVT  540
FNSSDNSVKC CCKKFEIMGI LCAHALKILH TRRLPDLPLQ YYLNRWTRDA RAGAVVDDFR  600
KSLPVNCRSS LTLRYADLAY MSLTIAVKGS STENSSGFTK VLLVQVLEEL DNFLKFDSDQ  660
GRFFEDMRNA NHEKVSRERV VDHSCADTVS RKKAKDKASG KIKSPLGKGK KRDNTQLQPT  720
GTDGQVGHVS VGATTTTSGP LMVSVPSSVP FYPARPWNLP HYSQGSIEQV EQATVTRSEN  780
DSTQCRIMSG GWSGPPSCPS EMLPPNVMGC PDTSDPHRLS FHAAGPSTLP QMPCIYPHVY  840
TEESNRLVDQ TMLQDGAGSN NQSNQGFIGF LSQRSNPHRL SESSMPQDIL DPPAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-141	FAR1 family protein