PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456806.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 1043aa MW: 118077 Da PI: 7.4855

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456806.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	82.4	7.9e-26	199	286	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fYn+YA++vGFs+rks+s+++ ++++ +r f+Cskeg +e+++ ++r +trt+Cka+l+++ ++dg + v++++leHnHel+p XP_026456806.1 199 DFYNRYARSVGFSIRKSSSTHR-SDKTVSRRIFCCSKEGVYREHSRG--APMKPRLQTRTDCKARLVIRIQDDGSYSVAEFVLEHNHELVP 286 6**************99987.7778**********999988..999***********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 1043 aa Download sequence
MAKALVIDQN LTSTLQINDE EEEKEDSGYD ADVTGNKIPE ETNTSNSNTG ARQGGSRNNA 60 ATALKSKASE LTLSFEGKVY VFHKVNPEKV QAVLSILGGS DIPDGGQCPR CLDDSRRIAS 120 LVRFREKRKD RYYDKKFRNN AHKKVEQKMD KKSTKSPIEL NETFQTGGNI LMETDIGVSK 180 DIEVPKLGMI FQSDDEAYDF YNRYARSVGF SIRKSSSTHR SDKTVSRRIF CCSKEGVYRE 240 HSRGAPMKPR LQTRTDCKAR LVIRIQDDGS YSVAEFVLEH NHELVPPSEV HILRSHRKMR 300 EAQTGMFNNL QLVGTGATGF YSYMSAEDGK THNLSFTQVD SSNHLDKRSK NILMGDVQIM 360 LDYFNCMQKE NPYFFYSIQM DSNNQICGCF WSDAKSRIDY SFFSDVVWVE TTFRTSDYDK 420 PCALFVGVNN HGQAIPFGCA LLWEETAESF VWLFQTFLEA MNGKPPESIF TDQAPQISDA 480 VGRVLPNSHH RLCPWHIYEN ALRHLSDVFE QHKSFAQDFK SCICGNETEE EFQFCWDALV 540 KKYNLAENKW VQDLYLLREK WAQVYGQEYF CAGITNTQRS EGMNFVKKYF KRTLTLREFV 600 AQYEKAVASR REKEKNQDSV SRQTKPDLRI AWPAVVQAAE RYTTKIFTLF QEEYVRTLDL 660 FVESLGEDGT VCTYRVSSFE NIKPRTVTFN SSDNSVKCCC KKFEIMGILC AHALKILHTR 720 RLPDLPLQYY LNRWTRDARA GAVVDDFRKS LPVNCRSSLT LRYADLAYMS LTIAVKGSST 780 ENSSGFTKVL LVQVLEELDN FLKFDSDQGR FFEDMRNANH EKVSRERVVD HSCADTVSRK 840 KAKDKASGKI KSPLGKGKKR DNTQLQPTGT DGQVGHVSVG ATTTTSGPLM VSVPSSVPFY 900 PARPWNLPHY SQGSIEQVEQ ATVTRSENDS TQCRIMSGGW SGPPSCPSEM LPPNVMGCPD 960 TSDPHRLSFH AAGPSTLPQM PCIYPHVYTE ESNRLVDQTM LQDGAGSNNQ SNQGFIGFLS 1020 QRSNPHRLSE SSMPQDILDP PAP

Sequence ? help Back to Top

Protein Sequence Length: 1043 aa Download sequence

MAKALVIDQN LTSTLQINDE EEEKEDSGYD ADVTGNKIPE ETNTSNSNTG ARQGGSRNNA  60
ATALKSKASE LTLSFEGKVY VFHKVNPEKV QAVLSILGGS DIPDGGQCPR CLDDSRRIAS  120
LVRFREKRKD RYYDKKFRNN AHKKVEQKMD KKSTKSPIEL NETFQTGGNI LMETDIGVSK  180
DIEVPKLGMI FQSDDEAYDF YNRYARSVGF SIRKSSSTHR SDKTVSRRIF CCSKEGVYRE  240
HSRGAPMKPR LQTRTDCKAR LVIRIQDDGS YSVAEFVLEH NHELVPPSEV HILRSHRKMR  300
EAQTGMFNNL QLVGTGATGF YSYMSAEDGK THNLSFTQVD SSNHLDKRSK NILMGDVQIM  360
LDYFNCMQKE NPYFFYSIQM DSNNQICGCF WSDAKSRIDY SFFSDVVWVE TTFRTSDYDK  420
PCALFVGVNN HGQAIPFGCA LLWEETAESF VWLFQTFLEA MNGKPPESIF TDQAPQISDA  480
VGRVLPNSHH RLCPWHIYEN ALRHLSDVFE QHKSFAQDFK SCICGNETEE EFQFCWDALV  540
KKYNLAENKW VQDLYLLREK WAQVYGQEYF CAGITNTQRS EGMNFVKKYF KRTLTLREFV  600
AQYEKAVASR REKEKNQDSV SRQTKPDLRI AWPAVVQAAE RYTTKIFTLF QEEYVRTLDL  660
FVESLGEDGT VCTYRVSSFE NIKPRTVTFN SSDNSVKCCC KKFEIMGILC AHALKILHTR  720
RLPDLPLQYY LNRWTRDARA GAVVDDFRKS LPVNCRSSLT LRYADLAYMS LTIAVKGSST  780
ENSSGFTKVL LVQVLEELDN FLKFDSDQGR FFEDMRNANH EKVSRERVVD HSCADTVSRK  840
KAKDKASGKI KSPLGKGKKR DNTQLQPTGT DGQVGHVSVG ATTTTSGPLM VSVPSSVPFY  900
PARPWNLPHY SQGSIEQVEQ ATVTRSENDS TQCRIMSGGW SGPPSCPSEM LPPNVMGCPD  960
TSDPHRLSFH AAGPSTLPQM PCIYPHVYTE ESNRLVDQTM LQDGAGSNNQ SNQGFIGFLS  1020
QRSNPHRLSE SSMPQDILDP PAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-140	FAR1 family protein