PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026456505.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | NF-YC | ||||||||
Protein Properties | Length: 265aa MW: 29623.3 Da PI: 6.0771 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 175 | 7.7e-55 | 80 | 182 | 2 | 101 |
NF-YC 2 lksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflv 93 l++fw++q ie++tdfknh+lPlarikki+kadedv+mi+aeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdflv XP_026456505.1 80 LQTFWASQyqeIEHTTDFKNHSLPLARIKKIMKADEDVRMIAAEAPVIFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFLV 174 89****998899*********************************************************************************** PP NF-YC 94 divprdel 101 divpr++l XP_026456505.1 175 DIVPREDL 182 *****987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 265 aa Download sequence |
MDQQGHGQPP AVGMVASAGQ MPYGTAQYPS NQIIGAPPVG SIQSPGQTAG FSASQAQLVQ 60 HQLAYQQAHQ QQQQQLQQHL QTFWASQYQE IEHTTDFKNH SLPLARIKKI MKADEDVRMI 120 AAEAPVIFAR ACEMFILELT LRSWNHTEEN KRRTLQKNDI AAAITRTDIF DFLVDIVPRE 180 DLKEEGIAMP RAGPVPVGGP SEALSYYYPP QVGAAGMMMG KPVLDPTLYG QQSHPYMPQQ 240 VWPQPPAQQQ QQQQQQQQQQ QQQDS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 152 | 158 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 8e-71 | NF-YC family protein |