PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026456082.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 437aa MW: 46692.1 Da PI: 9.5503 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.4 | 1.2e-05 | 56 | 78 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_026456082.1 56 FVCEICNKGFQRDQNLQLHRRGH 78 89*******************88 PP | |||||||
2 | zf-C2H2 | 15.1 | 6.6e-05 | 132 | 154 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ XP_026456082.1 132 WKCDKCSKKYAVQSDWKAHLKTC 154 58*******************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 437 aa Download sequence |
MTVSTSGEAS VSSSGAPPPI QPSLTAKKKR NLPGMPDPNA EVIALSPKTL MATNRFVCEI 60 CNKGFQRDQN LQLHRRGHNL PWKLRQRTNK EIRKRVYVCP ETSCVHHDPS RALGDLTGIK 120 KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH LKTCGTKEYK CDCGTLFSRR DSFITHRAFC 180 DALAEENAKA QTTTTTNSKS SEEQNNQIQN EKQVVVGSSC SSPPSTSAIS AIQTTALPGN 240 LQPPQTTSFS DLICGMGGGR SERSSTSATE QPTSLSLSSK NGSSMFASTM TSNQESHQFS 300 SPQPAMSATA LLQKAAQMGA AATSASLLRG LGFSVSGSSS SQQQQQTENL QWDTSGSNNL 360 HQHQIDNHGG AGLSDGLGVP SSLFGRKPAT LDFLGLGMDR GGGGSSFSSL MNSVDANLNI 420 ANAAGPFRDV NSGNTAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50700.1 | 1e-103 | C2H2 family protein |