PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026456081.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 480aa MW: 51301 Da PI: 9.256

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026456081.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.3	1.3e-05	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_026456081.1 56 FVCEICNKGFQRDQNLQLHRRGH 78 89*******************88 PP
2	zf-C2H2	15	7.3e-05	132	154	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H++t+ XP_026456081.1 132 WKCDKCSKKYAVQSDWKAHLKTC 154 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MTVSTSGEAS VSSSGAPPPI QPSLTAKKKR NLPGMPDPNA EVIALSPKTL MATNRFVCEI 60 CNKGFQRDQN LQLHRRGHNL PWKLRQRTNK EIRKRVYVCP ETSCVHHDPS RALGDLTGIK 120 KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH LKTCGTKEYK CDCGTLFSRR DSFITHRAFC 180 DALAEENAKA QTTTTTNSKS SEEQNNQIQN EKQVVVGSSC SSPPSTSAIS AIQTTELPLN 240 STTIANNNNS SCRNENSPSV NFSSNSNSMF TSLYPSSVAL PGNLQPPQTT SFSDLICGMG 300 GGRSERSSTS ATEQPTSLSL SSKNGSSMFA STMTSNQESH QFSSPQPAMS ATALLQKAAQ 360 MGAAATSASL LRGLGFSVSG SSSSQQQQQT ENLQWDTSGS NNLHQHQIDN HGGAGLSDGL 420 GVPSSLFGRK PATLDFLGLG MDRGGGGSSF SSLMNSVDAN LNIANAAGPF RDVNSGNTAK

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MTVSTSGEAS VSSSGAPPPI QPSLTAKKKR NLPGMPDPNA EVIALSPKTL MATNRFVCEI  60
CNKGFQRDQN LQLHRRGHNL PWKLRQRTNK EIRKRVYVCP ETSCVHHDPS RALGDLTGIK  120
KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH LKTCGTKEYK CDCGTLFSRR DSFITHRAFC  180
DALAEENAKA QTTTTTNSKS SEEQNNQIQN EKQVVVGSSC SSPPSTSAIS AIQTTELPLN  240
STTIANNNNS SCRNENSPSV NFSSNSNSMF TSLYPSSVAL PGNLQPPQTT SFSDLICGMG  300
GGRSERSSTS ATEQPTSLSL SSKNGSSMFA STMTSNQESH QFSSPQPAMS ATALLQKAAQ  360
MGAAATSASL LRGLGFSVSG SSSSQQQQQT ENLQWDTSGS NNLHQHQIDN HGGAGLSDGL  420
GVPSSLFGRK PATLDFLGLG MDRGGGGSSF SSLMNSVDAN LNIANAAGPF RDVNSGNTAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-102	C2H2 family protein