PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026455753.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 771aa MW: 87735.9 Da PI: 6.6929

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026455753.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	103	2.9e-32	76	169	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fYn+YA+++GFs+r+s ++s+r+g i++r+ vCs++g+r++++++ +++++r+ra+tr+gCka+++vkk+++gkw v+k+++eHnHel+p XP_026455753.1 76 FYNSYARRIGFSTRVSVYHRSRRDGAIICRQIVCSRQGFRHDKDRDgnssESRSKRQRAVTRVGCKAMIMVKKQDSGKWIVSKFVKEHNHELVP 169 9****************************************9999998889999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 771 aa Download sequence
MEFEPLTTDN AVIEFDMGSG EEDGIDIEHP DEEEEDYSDQ IMEGSVSQDF FASDLDSNLE 60 PFEGMEFESE EAARIFYNSY ARRIGFSTRV SVYHRSRRDG AIICRQIVCS RQGFRHDKDR 120 DGNSSESRSK RQRAVTRVGC KAMIMVKKQD SGKWIVSKFV KEHNHELVPP DKVHSLRSHR 180 HVSGPARSLI DTLQAAGIGP SGVMSVLIKE SGGANNVGFT TVDCRNYMSG SKQKTLGTGG 240 QHVLDYLRKM RAENPNFFFA IQGDNDHSTG NILWVDANSR MNYNYFGDTV TFDTTYRTNR 300 YRVPFAPFTG LNHHGQPVLF GCAIILNESE ASFVWLFETW LSVMSGTHPV SITTDQDRVI 360 RAAVSHVFPN TRHRFCRWSI FREAQEKLST VYQSYPNFEA EFRKCVNMTE TIDEFEMCWE 420 SLLQRFGLVE NEWFQSMYLV REQWVPVYLR DTFFGDMSIT QSSESINSYF DGYINASTTI 480 QILVKQYEKA IASRHEKEVK ADYDTLNTVP VLKTPSPMEK QAASLFTRRM FMKFQEELVE 540 TLAITATKTK DSGTITTYRV AKFGEDHKAY SVSFHVFEMK ANCSCQMFEF SGIVCRHMLA 600 VFKVTNVLTL PSQYVLKRWT RNARSGVVVS ERAVELPNNS RESLTVRFNN LRQEAIKFVE 660 EGAKSLHTYN VAIEALHEAA KKVAAAKGPG IGVGSLVNGS HHSEGNQSGQ SQSFTPDEKD 720 KKILELMNEL DTVNQRCEIY RGNLLGVLKD MEEQKLKLSV KVQNVKLNLK D

Sequence ? help Back to Top

Protein Sequence Length: 771 aa Download sequence

MEFEPLTTDN AVIEFDMGSG EEDGIDIEHP DEEEEDYSDQ IMEGSVSQDF FASDLDSNLE  60
PFEGMEFESE EAARIFYNSY ARRIGFSTRV SVYHRSRRDG AIICRQIVCS RQGFRHDKDR  120
DGNSSESRSK RQRAVTRVGC KAMIMVKKQD SGKWIVSKFV KEHNHELVPP DKVHSLRSHR  180
HVSGPARSLI DTLQAAGIGP SGVMSVLIKE SGGANNVGFT TVDCRNYMSG SKQKTLGTGG  240
QHVLDYLRKM RAENPNFFFA IQGDNDHSTG NILWVDANSR MNYNYFGDTV TFDTTYRTNR  300
YRVPFAPFTG LNHHGQPVLF GCAIILNESE ASFVWLFETW LSVMSGTHPV SITTDQDRVI  360
RAAVSHVFPN TRHRFCRWSI FREAQEKLST VYQSYPNFEA EFRKCVNMTE TIDEFEMCWE  420
SLLQRFGLVE NEWFQSMYLV REQWVPVYLR DTFFGDMSIT QSSESINSYF DGYINASTTI  480
QILVKQYEKA IASRHEKEVK ADYDTLNTVP VLKTPSPMEK QAASLFTRRM FMKFQEELVE  540
TLAITATKTK DSGTITTYRV AKFGEDHKAY SVSFHVFEMK ANCSCQMFEF SGIVCRHMLA  600
VFKVTNVLTL PSQYVLKRWT RNARSGVVVS ERAVELPNNS RESLTVRFNN LRQEAIKFVE  660
EGAKSLHTYN VAIEALHEAA KKVAAAKGPG IGVGSLVNGS HHSEGNQSGQ SQSFTPDEKD  720
KKILELMNEL DTVNQRCEIY RGNLLGVLKD MEEQKLKLSV KVQNVKLNLK D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	0.0	FAR1 family protein