PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_026455652.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver
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Family | C2H2 | ||||||||
Protein Properties | Length: 256aa MW: 27860.9 Da PI: 7.5418 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 10.8 | 0.0016 | 92 | 114 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+ksF + L H +H XP_026455652.1 92 YKCSVCNKSFHSYQALGGHKASH 114 9*********9988888887776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MALEALTSPS TIPIYEDDHS NYLDQSWAKR KRSKRNIHRM ENSHISNPTE EEYLALCLIM 60 LARGSTDDSS TNLPVYNNCY APPQAPTLKL NYKCSVCNKS FHSYQALGGH KASHRKLVVF 120 APGSSSQQED QLSTSTTTST TTTSAANISS SGKTHECSIC HKCFPSGQAL GGHKRCHYDG 180 GSSITATTAA SSDGMGSTQT HRSSSDFDLN LPALPEFWSA GNFGVHGKNS KYQIFADDEV 240 ESPLPSKKPR LLMDSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 6e-54 | C2H2 family protein |