PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026455406.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

FAR1

Protein Properties

Length: 1148aa MW: 131085 Da PI: 6.7714

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026455406.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	80.5	3e-25	163	252	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Y++YAke GFs+rks+ ++s+ +++ ++r++vC k+g r+ ++k+ + k r+r +tr++C+a + +k++ +gkw+v+++++eHnH+l XP_026455406.1 163 EYYKAYAKENGFSIRKSHVERSRVDHSLISRKYVCVKQGVRSLKDKRyEGKVVRHRRVTRVDCRAAMIIKRR-SGKWVVHRFHKEHNHDLD 252 69**************************************999986778889**************.**************97 PP
2	FAR1	79.9	4.8e-25	391	480	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YAke GFs+rks+ ++s+ ++++++r +vC ++g r++++k+ + k r+r+etr +C+a++ +k++ +gkw+v+k+ +HnH+l+ XP_026455406.1 391 EFYNAYAKEKGFSIRKSRIERSRVDHSMISRLYVCANQGLRSTRDKRyEGKVVRPRQETRLDCRACMFIKRR-SGKWVVDKFLDDHNHDLV 480 6***************************************999996778899**************.**************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1148 aa Download sequence
MQNSSGSPRS PTYASFYAPS SSSSSPPWSP FQITSSSISH SVTNVGSVQT LEMEGALPNE 60 FTHLGSANDP PMNQTWQQIE HSQRCIDMED AINLGQEILE AEEVEYDENI QEPLPTIDGQ 120 EYAKKDVDST ENSGREDGNV FLIKLGSEPY IGLEFCSEGE AYEYYKAYAK ENGFSIRKSH 180 VERSRVDHSL ISRKYVCVKQ GVRSLKDKRY EGKVVRHRRV TRVDCRAAMI IKRRSGKWVV 240 HRFHKEHNHD LDPSKACGHK EQNHDLDPSK DCELQPHRNM ANSTKSILEA LYKTQCIDME 300 DDTTLGQKVL NPDAAVPDTT IQAPQTIADL QEDVNEGGIS GREANNGEES PIGEINAGES 360 SGKEDNKSSL FKLGSEPFIG LQFASQDEAY EFYNAYAKEK GFSIRKSRIE RSRVDHSMIS 420 RLYVCANQGL RSTRDKRYEG KVVRPRQETR LDCRACMFIK RRSGKWVVDK FLDDHNHDLV 480 DPTKADKLRS HKKMTNTTKS MVEALYKCGI GPAKIIDLLT EVADGAKSIL ESNEQEEYEN 540 EMKKERKNNI RVECYRLLES FQELQASDPG FFYAVEFGEN RSMRSIFWAD SQAREAYKKF 600 GDVLVFDSIC RTNKFLYSFV AFTGVNHHRQ PVLFGCGFLA DETVETFTWF FNTWLRAMSN 660 HQPTSMITNQ DKAVKVAVEK VFPETRHRFC KWYIEKDETE NLGHIFNMHP EFQAEYNKCI 720 YSSRAPKDFE LGWEVLLLKY NLKDNKWLNR LYNHRHHWVP LYLQDTFFGG MTTTHKCEGM 780 IAYFNGFLNG GTPFSEFLSQ YQGAIKQRHE EEVNENFLTV CTRAVLTSKN PIEEQASRVY 840 TRNMFAAFEN EFVESSGCTA RKIAEEKSIC KYLVGKYKDK DDRMNIVTIA PTDKRASCSC 900 QMFEFEGMLC RHVLKVFQVV NVFEIPPKYI LKRWTMSSSY YVGPWSNDEV GAGSRDQCGN 960 SVWDLRAATR SFVEIGETSE KRVNVAINIL QEGIRKLDLI SVPAVASIPH ENLGSNSVHQ 1020 GENIDEQTDS IWMMDLNISV PDPPRVKQKG RPVSSRMKLG IEQVQKKKRT CGTCKETGHY 1080 TRTCPKGVVH HHTQNPTMLT DPFDHPQSST IFHDHSQASV MLQGPVDESQ NSIMLQGPYG 1140 QSQIFAML

Sequence ? help Back to Top

Protein Sequence Length: 1148 aa Download sequence

MQNSSGSPRS PTYASFYAPS SSSSSPPWSP FQITSSSISH SVTNVGSVQT LEMEGALPNE  60
FTHLGSANDP PMNQTWQQIE HSQRCIDMED AINLGQEILE AEEVEYDENI QEPLPTIDGQ  120
EYAKKDVDST ENSGREDGNV FLIKLGSEPY IGLEFCSEGE AYEYYKAYAK ENGFSIRKSH  180
VERSRVDHSL ISRKYVCVKQ GVRSLKDKRY EGKVVRHRRV TRVDCRAAMI IKRRSGKWVV  240
HRFHKEHNHD LDPSKACGHK EQNHDLDPSK DCELQPHRNM ANSTKSILEA LYKTQCIDME  300
DDTTLGQKVL NPDAAVPDTT IQAPQTIADL QEDVNEGGIS GREANNGEES PIGEINAGES  360
SGKEDNKSSL FKLGSEPFIG LQFASQDEAY EFYNAYAKEK GFSIRKSRIE RSRVDHSMIS  420
RLYVCANQGL RSTRDKRYEG KVVRPRQETR LDCRACMFIK RRSGKWVVDK FLDDHNHDLV  480
DPTKADKLRS HKKMTNTTKS MVEALYKCGI GPAKIIDLLT EVADGAKSIL ESNEQEEYEN  540
EMKKERKNNI RVECYRLLES FQELQASDPG FFYAVEFGEN RSMRSIFWAD SQAREAYKKF  600
GDVLVFDSIC RTNKFLYSFV AFTGVNHHRQ PVLFGCGFLA DETVETFTWF FNTWLRAMSN  660
HQPTSMITNQ DKAVKVAVEK VFPETRHRFC KWYIEKDETE NLGHIFNMHP EFQAEYNKCI  720
YSSRAPKDFE LGWEVLLLKY NLKDNKWLNR LYNHRHHWVP LYLQDTFFGG MTTTHKCEGM  780
IAYFNGFLNG GTPFSEFLSQ YQGAIKQRHE EEVNENFLTV CTRAVLTSKN PIEEQASRVY  840
TRNMFAAFEN EFVESSGCTA RKIAEEKSIC KYLVGKYKDK DDRMNIVTIA PTDKRASCSC  900
QMFEFEGMLC RHVLKVFQVV NVFEIPPKYI LKRWTMSSSY YVGPWSNDEV GAGSRDQCGN  960
SVWDLRAATR SFVEIGETSE KRVNVAINIL QEGIRKLDLI SVPAVASIPH ENLGSNSVHQ  1020
GENIDEQTDS IWMMDLNISV PDPPRVKQKG RPVSSRMKLG IEQVQKKKRT CGTCKETGHY  1080
TRTCPKGVVH HHTQNPTMLT DPFDHPQSST IFHDHSQASV MLQGPVDESQ NSIMLQGPYG  1140
QSQIFAML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-157	FAR1 family protein