PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_026455075.1

Organism

Papaver somniferum

Taxonomic ID

3469

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Ranunculales; Papaveraceae; Papaveroideae; Papaver

Family

C2H2

Protein Properties

Length: 435aa MW: 47099.2 Da PI: 9.2959

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_026455075.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.4	5.2e-05	207	229	2	23
EETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23 +Cp Cg++F ++L+ H+++ H XP_026455075.1 207 TCPVCGEVFMKTEDLELHQSVrH 229 7******************9988 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MPETRNYRKP TEKTHTISSQ KEKSLPPLTR TETNTATATS PAASPPSWVV MRSIFSCKHD 60 QQEEKQEAEP ISTTKEGNSK RCKKMVCSGS SLCSNTKVMH RPESLSPESS KKWGSSLSAS 120 CSSSSNGSTS RRSNGVISTS SVSTTASSSS SASSAAAGTS STTRSSGGGS FRGMQFRRLS 180 GCYECRMVVD PSHLVSRDPS LRNTLSTCPV CGEVFMKTED LELHQSVRHA VSELGPEDSS 240 RNIVEIIFQS SWLKKQAPVC KIERILKVNN TQKTITRFED YRESIKTKAN KLIKKHPRCV 300 ADGNELLRFH CTTFVCSIGV NGSSNLCNSI PQCNVCSIIK NGFKIEGMTG GGGICTTATS 360 GKAHDNAKIT SQKEKRAMLV CRVIAGRVKR NQDGSGAEEF DSVAGPSGIY SDLDELSVFN 420 YKAILPCFVV IYGGF

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MPETRNYRKP TEKTHTISSQ KEKSLPPLTR TETNTATATS PAASPPSWVV MRSIFSCKHD  60
QQEEKQEAEP ISTTKEGNSK RCKKMVCSGS SLCSNTKVMH RPESLSPESS KKWGSSLSAS  120
CSSSSNGSTS RRSNGVISTS SVSTTASSSS SASSAAAGTS STTRSSGGGS FRGMQFRRLS  180
GCYECRMVVD PSHLVSRDPS LRNTLSTCPV CGEVFMKTED LELHQSVRHA VSELGPEDSS  240
RNIVEIIFQS SWLKKQAPVC KIERILKVNN TQKTITRFED YRESIKTKAN KLIKKHPRCV  300
ADGNELLRFH CTTFVCSIGV NGSSNLCNSI PQCNVCSIIK NGFKIEGMTG GGGICTTATS  360
GKAHDNAKIT SQKEKRAMLV CRVIAGRVKR NQDGSGAEEF DSVAGPSGIY SDLDELSVFN  420
YKAILPCFVV IYGGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-101	C2H2 family protein